##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779705_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 15962 Sequences flagged as poor quality 0 Sequence length 76 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.43565969176795 34.0 32.0 34.0 23.0 34.0 2 29.250156621977197 34.0 27.0 34.0 12.0 34.0 3 28.399323393058513 34.0 23.0 34.0 11.0 34.0 4 31.286367623104873 34.0 32.0 34.0 23.0 34.0 5 30.70899636637013 34.0 32.0 34.0 21.0 34.0 6 33.41053752662574 37.0 34.0 38.0 21.0 38.0 7 34.43854153614835 38.0 34.0 38.0 26.0 38.0 8 33.72177671970931 38.0 34.0 38.0 21.0 38.0 9 35.08407467735873 38.0 36.0 38.0 27.0 38.0 10-11 34.99808921187821 38.0 36.0 38.0 26.5 38.0 12-13 33.69198721964666 37.5 32.5 38.0 19.5 38.0 14-15 34.027534143591026 37.5 34.5 38.0 23.5 38.0 16-17 33.57827966420248 37.5 32.5 38.0 19.0 38.0 18-19 34.18230798145596 38.0 34.0 38.0 23.5 38.0 20-21 33.22378148101741 37.5 31.0 38.0 18.5 38.0 22-23 33.07470868312242 37.5 31.5 38.0 19.0 38.0 24-25 34.66191580002506 37.5 35.0 38.0 25.5 38.0 26-27 32.790690389675476 37.0 30.5 38.0 17.0 38.0 28-29 35.29542037338679 38.0 36.5 38.0 29.0 38.0 30-31 35.67767197093096 38.0 37.0 38.0 31.0 38.0 32-33 35.74220022553565 38.0 37.0 38.0 31.0 38.0 34-35 35.78411226663325 38.0 37.0 38.0 31.5 38.0 36-37 33.5203921814309 38.0 33.0 38.0 18.5 38.0 38-39 31.341341937100616 36.5 27.0 38.0 11.0 38.0 40-41 33.11167146974063 37.0 32.5 38.0 17.0 38.0 42-43 34.14261997243453 37.5 35.0 38.0 19.0 38.0 44-45 35.77189575241198 38.0 37.0 38.0 32.0 38.0 46-47 34.14321513594788 38.0 34.0 38.0 22.0 38.0 48-49 33.6327527878712 37.5 33.5 38.0 19.0 38.0 50-51 31.19308357348703 36.5 26.5 38.0 11.0 38.0 52-53 34.982959528881096 37.5 35.5 38.0 28.5 38.0 54-55 34.02333667460218 37.5 34.5 38.0 19.0 38.0 56-57 34.42876832477133 38.0 35.5 38.0 21.0 38.0 58-59 35.54971181556196 38.0 37.0 38.0 31.0 38.0 60-61 35.91720962285428 38.0 37.0 38.0 33.5 38.0 62-63 35.79880340809423 38.0 37.0 38.0 32.5 38.0 64-65 35.54864678611703 38.0 37.0 38.0 30.5 38.0 66-67 33.452230296955264 38.0 34.0 38.0 21.0 38.0 68-69 33.426888861044986 37.5 34.0 38.0 16.5 38.0 70-71 32.82057386292445 37.0 32.5 38.0 16.0 38.0 72-73 31.599517604310236 37.0 29.0 38.0 11.0 38.0 74-75 34.130278160631505 37.5 35.0 38.0 24.0 38.0 76 34.813056008019046 37.0 36.0 38.0 27.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 12.0 14 34.0 15 72.0 16 92.0 17 116.0 18 136.0 19 139.0 20 113.0 21 96.0 22 107.0 23 115.0 24 89.0 25 114.0 26 122.0 27 161.0 28 216.0 29 235.0 30 337.0 31 489.0 32 764.0 33 1285.0 34 1918.0 35 3095.0 36 3881.0 37 2223.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.77784738754542 23.280290690389677 12.70517479012655 31.23668713193835 2 18.500187946372634 19.264503195088334 38.12178924946748 24.113519609071545 3 18.813431900764314 19.527628116777347 33.65493045984213 28.004009522616215 4 13.024683623606064 18.224533266507954 35.13970680365869 33.61107630622729 5 12.936975316376396 32.07618092970806 38.17190828217015 16.814935471745397 6 26.061897005387795 34.062147600551306 17.86743515850144 22.008520235559452 7 25.61082571106378 29.137952637514097 21.93334168650545 23.317879964916678 8 21.651422127552937 33.68625485528129 18.876080691642652 25.78624232552312 9 22.183936850018796 17.12191454704924 21.300588898634256 39.39355970429771 10-11 23.840997368750784 25.61395815060769 25.996115774965546 24.54892870567598 12-13 22.876205989224406 22.537902518481392 28.057260994862798 26.5286304974314 14-15 21.297456459090338 23.878586643277785 23.781481017416365 31.042475880215513 16-17 21.742262874326528 26.337551685252475 27.208369878461347 24.711815561959654 18-19 20.79626613206365 26.65392807918807 27.330535020674102 25.219270768074175 20-21 21.57937601804285 25.466733492043602 27.77534143591029 25.17854905400326 22-23 21.883222653802783 25.087708307229672 28.298458839744395 24.730610199223154 24-25 20.301340684124796 27.255356471620097 26.061897005387795 26.381405838867312 26-27 20.727352462097482 25.78624232552312 28.423756421501068 25.062648790878335 28-29 21.382032326776095 27.255356471620097 27.09873449442426 24.263876707179552 30-31 20.746147099360982 27.305475504322768 26.152737752161382 25.795639644154868 32-33 20.320135321388296 27.19584012028568 27.15511840621476 25.328906152111262 34-35 21.34444305224909 26.606941486029317 27.349329657937606 24.699285803783987 36-37 20.780603934344064 24.833980704172408 30.043227665706052 24.34218769577747 38-39 21.1408344818945 24.389174288936225 31.430898383661194 23.039092845508083 40-41 21.57937601804285 24.514471870692894 26.0806916426513 27.825460468612956 42-43 19.424257611828093 25.24119784488159 26.882596165893997 28.45194837739632 44-45 20.63024683623606 26.403332915674728 27.19584012028568 25.770580127803534 46-47 21.14709936098233 25.144092219020177 28.483272772835484 25.225535647162012 48-49 21.024934218769577 26.306227289813304 27.884976819947376 24.78386167146974 50-51 21.07192081192833 24.11665204861546 30.635258739506327 24.176168399949884 52-53 20.921563713820323 25.60769327151986 27.791003633629867 25.679739381029947 54-55 20.674100989850896 26.187194587144468 28.022804159879716 25.115900263124924 56-57 20.790001252975816 25.23806540533768 28.45508081694023 25.51685252474627 58-59 20.21049993735121 26.346949003884223 28.41749154241323 25.025059516351334 60-61 20.301340684124796 25.88021551184062 27.84738754542037 25.97105625861421 62-63 19.449317128179427 26.544292695150983 27.935095852650043 26.071294324019544 64-65 20.244956772334294 27.10813181305601 26.541160255607068 26.105751159002633 66-67 19.10161633880466 24.595915298834733 25.68287182057386 30.61959654178674 68-69 19.28571428571429 25.159774436090228 26.42857142857143 29.12593984962406 70-71 19.521363237689513 24.752537276030573 25.285051998496428 30.441047487783486 72-73 18.991980954767573 23.339807041724097 24.968675604560833 32.6995363989475 74-75 19.822077433905523 26.18092970805663 26.888861044981834 27.10813181305601 76 20.68036586893873 26.331286806164638 26.976569352211506 26.01177797268513 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.5 7 0.5 8 0.0 9 0.0 10 0.0 11 0.5 12 1.0 13 0.5 14 0.0 15 0.0 16 0.5 17 1.0 18 3.0 19 5.0 20 8.5 21 12.0 22 14.0 23 21.0 24 30.0 25 34.0 26 40.5 27 65.0 28 101.5 29 120.0 30 143.5 31 191.5 32 255.5 33 295.0 34 339.0 35 413.0 36 486.5 37 530.0 38 609.5 39 776.5 40 882.5 41 933.0 42 965.0 43 951.5 44 947.0 45 964.5 46 973.0 47 934.0 48 868.5 49 792.0 50 742.0 51 699.0 52 614.0 53 531.5 54 491.0 55 442.0 56 372.0 57 307.0 58 263.0 59 256.0 60 231.5 61 196.0 62 178.0 63 168.5 64 160.0 65 140.0 66 119.0 67 119.0 68 134.0 69 124.5 70 105.0 71 110.0 72 113.0 73 102.0 74 85.5 75 83.0 76 73.0 77 61.0 78 48.5 79 38.0 80 27.0 81 18.0 82 17.0 83 14.0 84 12.5 85 9.0 86 5.0 87 3.0 88 4.0 89 3.5 90 1.0 91 0.0 92 0.0 93 1.0 94 1.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.01252975817566721 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 15962.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 97.06803658689387 #Duplication Level Percentage of deduplicated Percentage of total 1 97.54743771782626 94.68738253351711 2 2.0717697173099263 4.022052374389174 3 0.2646185620240093 0.7705801278035335 4 0.07099522395766103 0.2756546798646786 5 0.032270556344391375 0.15662197719584012 6 0.006454111268878275 0.03758927452700163 7 0.0 0.0 8 0.006454111268878275 0.05011903270266884 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.006264879087833605 0.0 5 0.0 0.0 0.0 0.006264879087833605 0.0 6 0.0 0.0 0.0 0.006264879087833605 0.0 7 0.0 0.0 0.0 0.006264879087833605 0.0 8 0.0 0.0 0.0 0.006264879087833605 0.0 9 0.0 0.0 0.0 0.006264879087833605 0.0 10 0.0 0.0 0.0 0.006264879087833605 0.0 11 0.0 0.0 0.0 0.006264879087833605 0.0 12 0.0 0.0 0.0 0.006264879087833605 0.0 13 0.0 0.0 0.0 0.006264879087833605 0.0 14 0.0 0.0 0.0 0.006264879087833605 0.0 15 0.0 0.0 0.0 0.006264879087833605 0.0 16 0.0 0.0 0.0 0.006264879087833605 0.0 17 0.0 0.0 0.0 0.006264879087833605 0.0 18 0.0 0.0 0.0 0.006264879087833605 0.0 19 0.0 0.0 0.0 0.01252975817566721 0.0 20 0.0 0.0 0.0 0.01252975817566721 0.0 21 0.0 0.0 0.0 0.01252975817566721 0.0 22 0.0 0.0 0.0 0.03758927452700163 0.0 23 0.0 0.0 0.0 0.04385415361483523 0.0 24 0.0 0.0 0.0 0.05011903270266884 0.0 25 0.0 0.0 0.0 0.05011903270266884 0.0 26 0.0 0.0 0.0 0.05011903270266884 0.0 27 0.0 0.0 0.0 0.05011903270266884 0.0 28 0.0 0.0 0.0 0.05011903270266884 0.0 29 0.0 0.0 0.0 0.05011903270266884 0.0 30 0.0 0.0 0.0 0.05011903270266884 0.0 31 0.0 0.0 0.0 0.05011903270266884 0.0 32 0.0 0.0 0.0 0.05011903270266884 0.0 33 0.0 0.0 0.0 0.05638391179050244 0.0 34 0.0 0.0 0.0 0.06891366996616966 0.0 35 0.0 0.0 0.0 0.08144342814183686 0.0 36 0.0 0.0 0.0 0.11276782358100489 0.0 37 0.0 0.0 0.0 0.1440922190201729 0.0 38 0.0 0.0 0.0 0.19421125172284176 0.0 39 0.0 0.0 0.0 0.24433028442551058 0.0 40 0.0 0.0 0.0 0.31324395439168023 0.0 41 0.0 0.0 0.0 0.3884225034456835 0.0 42 0.0 0.0 0.0 0.47613081067535395 0.0 43 0.0 0.0 0.0 0.6578123042225285 0.0 44 0.0 0.0 0.0 0.7893747650670342 0.0 45 0.0 0.0 0.0 0.8770830722967047 0.0 46 0.0 0.0 0.0 1.0211752913168777 0.0 47 0.0 0.0 0.0 1.190327026688385 0.0 48 0.0 0.0 0.0 1.3532138829720586 0.0 49 0.0 0.0 0.0 1.4346573111138956 0.0 50 0.0 0.0 0.0 1.6351334419245709 0.0 51 0.0 0.0 0.0 1.8731988472622478 0.0 52 0.0 0.0 0.0 2.0799398571607566 0.0 53 0.0 0.0 0.0 2.3493296579376017 0.0 54 0.0 0.0 0.0 2.662573612329282 0.0 55 0.0 0.0 0.0 2.931963413106127 0.0 56 0.0 0.0 0.0 3.126174664828969 0.0 57 0.0 0.0 0.0 3.3266507956396443 0.0 58 0.0 0.0 0.0 3.439418619220649 0.0 59 0.0 0.0 0.0 3.577245959152988 0.0 60 0.0 0.0 0.0 3.6962786618218266 0.0 61 0.0 0.0 0.0 3.8716952762811676 0.0 62 0.0 0.0 0.0 3.9406089462473375 0.0 63 0.0 0.0 0.0 4.090966044355344 0.0 64 0.0 0.0 0.0 4.247588021551184 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTACGA 15 0.0021847868 70.00001 21 TTCAATT 15 0.0021847868 70.00001 52 TGTTTAT 15 0.0021847868 70.00001 58 >>END_MODULE