##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779703_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7432 Sequences flagged as poor quality 0 Sequence length 76 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.935279870828847 34.0 32.0 34.0 21.0 34.0 2 29.08840150699677 34.0 24.0 34.0 12.0 34.0 3 28.175188374596342 34.0 23.0 34.0 11.0 34.0 4 31.005516684607105 34.0 32.0 34.0 23.0 34.0 5 30.36302475780409 34.0 32.0 34.0 21.0 34.0 6 33.20869214208827 37.0 34.0 38.0 21.0 38.0 7 34.20250269106566 38.0 34.0 38.0 24.0 38.0 8 33.334364908503765 38.0 34.0 38.0 21.0 38.0 9 34.85898815931109 38.0 36.0 38.0 26.0 38.0 10-11 34.65345801937567 38.0 36.0 38.0 25.0 38.0 12-13 33.3807857911733 37.5 32.0 38.0 19.0 38.0 14-15 33.69671689989236 37.5 34.0 38.0 22.0 38.0 16-17 33.27650699677072 37.5 31.5 38.0 19.0 38.0 18-19 33.9330597416577 38.0 34.0 38.0 23.0 38.0 20-21 32.72571313240043 37.0 30.5 38.0 17.5 38.0 22-23 32.66227125941873 37.5 31.0 38.0 18.5 38.0 24-25 34.27321044133477 37.5 35.0 38.0 24.5 38.0 26-27 32.41220398277718 37.0 30.5 38.0 16.0 38.0 28-29 34.83248116254037 38.0 36.0 38.0 26.0 38.0 30-31 35.264397201291715 38.0 37.0 38.0 27.0 38.0 32-33 35.25679494079655 38.0 37.0 38.0 27.0 38.0 34-35 35.40527448869753 38.0 37.0 38.0 29.5 38.0 36-37 33.060347147470395 37.5 30.5 38.0 17.5 38.0 38-39 31.011167922497307 36.5 26.5 38.0 11.0 38.0 40-41 32.58793057050592 37.0 30.5 38.0 16.0 38.0 42-43 33.7543057050592 37.5 34.0 38.0 18.5 38.0 44-45 35.39504843918192 38.0 37.0 38.0 29.0 38.0 46-47 33.916846071044134 37.5 34.0 38.0 21.0 38.0 48-49 33.36127556512379 37.5 33.0 38.0 18.5 38.0 50-51 30.79709364908504 36.5 25.5 38.0 11.0 38.0 52-53 34.61067007534984 37.5 35.0 38.0 26.0 38.0 54-55 33.65756189451022 37.5 33.5 38.0 18.5 38.0 56-57 34.09095801937568 38.0 35.5 38.0 19.0 38.0 58-59 35.248856297093646 38.0 36.5 38.0 29.0 38.0 60-61 35.53848223896663 38.0 37.0 38.0 30.5 38.0 62-63 35.45822120559742 38.0 37.0 38.0 29.0 38.0 64-65 35.23250807319699 38.0 37.0 38.0 27.5 38.0 66-67 33.12022335844995 37.5 34.0 38.0 11.0 38.0 68-69 33.15769644779333 37.0 33.0 38.0 16.0 38.0 70-71 32.470129171151775 37.0 30.5 38.0 15.0 38.0 72-73 31.42471743810549 36.5 27.0 38.0 11.0 38.0 74-75 33.86773412271259 37.5 34.5 38.0 24.0 38.0 76 34.51829924650161 37.0 35.0 38.0 25.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 4.0 14 19.0 15 30.0 16 49.0 17 59.0 18 89.0 19 76.0 20 68.0 21 54.0 22 55.0 23 58.0 24 62.0 25 71.0 26 60.0 27 97.0 28 116.0 29 144.0 30 172.0 31 256.0 32 371.0 33 587.0 34 881.0 35 1289.0 36 1753.0 37 1009.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.33799784714747 21.407427341227127 12.970936490850377 31.283638320775026 2 17.868675995694293 18.393433799784713 40.16415500538213 23.57373519913886 3 18.729817007534987 20.546286329386437 33.90742734122713 26.816469321851454 4 12.244348762109796 19.294940796555434 36.28902045209903 32.17168998923574 5 11.504305705059203 33.10010764262648 39.2491926803014 16.146393972012916 6 24.192680301399356 36.692680301399356 17.855220667384284 21.259418729817007 7 23.963939720129172 29.60172228202368 23.2508073196986 23.183530678148546 8 20.021528525296016 34.41872981700754 19.792787944025832 25.766953713670617 9 20.882669537136707 15.446716899892357 21.555435952637243 42.115177610333696 10-11 22.22147470398278 25.329655543595265 28.155274488697522 24.293595263724434 12-13 21.965823466092573 22.01291711517761 28.3772874058127 27.643972012917118 14-15 21.319967707212058 23.57373519913886 24.78471474703983 30.321582346609254 16-17 21.905274488697522 25.52475780409042 27.025026910656617 25.544940796555437 18-19 20.33772874058127 25.666038751345532 27.132669537136707 26.86356297093649 20-21 21.171959095801938 25.222012917115176 27.650699677072122 25.955328310010767 22-23 21.67653390742734 24.488697524219592 28.094725511302478 25.740043057050592 24-25 20.768299246501616 26.305166846071042 25.376749192680304 27.549784714747037 26-27 20.667384284176535 25.32292787944026 28.175457481162542 25.834230355220665 28-29 20.70102260495156 27.85252960172228 26.668460710441334 24.777987082884824 30-31 20.573196986006458 27.395048439181917 26.271528525296016 25.760226049515605 32-33 20.505920344456406 27.21340150699677 26.702099031216363 25.578579117330463 34-35 21.34687836383208 25.96205597416577 26.73573735199139 25.955328310010767 36-37 21.629440258342303 24.44833153928956 29.440258342303554 24.481969860064588 38-39 21.60252960172228 23.970667384284177 31.532561894510224 22.894241119483315 40-41 21.11141011840689 24.730893433799785 25.874596340150703 28.28310010764263 42-43 19.893702906350917 25.444025834230356 26.856835306781484 27.805435952637243 44-45 19.429494079655544 26.264800861141012 27.643972012917118 26.66173304628633 46-47 21.272874058127016 25.053821313240043 28.619483315392895 25.053821313240043 48-49 21.64962325080732 26.412809472551128 27.3748654467169 24.56270182992465 50-51 22.477125941872984 23.03552206673843 30.079386437029065 24.407965554359524 52-53 19.853336921420883 26.68864370290635 27.368137782561895 26.08988159311087 54-55 21.703444564047363 26.251345532831 26.607911733046286 25.43729817007535 56-57 20.680839612486544 26.1235199138859 27.34795479009688 25.84768568353068 58-59 19.826426264800862 27.206673842841766 26.89047362755651 26.076426264800862 60-61 19.954251883745965 26.607911733046286 26.971205597416574 26.466630785791175 62-63 18.884553283100107 26.73573735199139 28.10145317545748 26.27825618945102 64-65 19.72551130247578 27.590150699677075 27.226856835306783 25.45748116254037 66-67 18.736544671689987 25.430570505920347 24.643433799784713 31.189451022604953 68-69 18.253380878692056 26.616430061225866 25.681221826010898 29.448967234071183 70-71 19.254574811625403 25.592034445640472 25.349838536060282 29.803552206673846 72-73 18.22524219590958 25.18164693218515 24.582884822389666 32.01022604951561 74-75 19.180570505920343 27.233584499461788 26.042787944025836 27.543057050592033 76 20.855758880516685 26.04951560818084 26.170613562970935 26.924111948331543 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 3.0 21 6.0 22 6.0 23 8.0 24 15.5 25 21.0 26 20.5 27 25.5 28 45.0 29 59.0 30 61.0 31 82.0 32 110.5 33 120.0 34 140.5 35 188.5 36 244.5 37 273.0 38 293.5 39 335.0 40 381.0 41 431.0 42 456.0 43 455.0 44 456.0 45 444.0 46 430.0 47 449.5 48 464.5 49 405.0 50 350.0 51 343.0 52 303.0 53 237.5 54 205.0 55 197.5 56 173.5 57 141.0 58 125.0 59 116.0 60 90.5 61 70.5 62 67.0 63 66.0 64 59.5 65 59.0 66 64.0 67 64.0 68 62.0 69 62.5 70 64.0 71 63.0 72 53.0 73 48.0 74 50.0 75 47.0 76 38.5 77 24.0 78 14.0 79 10.0 80 11.0 81 8.0 82 3.5 83 3.0 84 3.5 85 2.5 86 0.5 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.006727664155005381 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 7432.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 97.7529601722282 #Duplication Level Percentage of deduplicated Percentage of total 1 98.0041293874742 95.80193756727664 2 1.7481073640743288 3.417653390742734 3 0.20646937370956642 0.6054897739504844 4 0.02752924982794219 0.1076426264800861 5 0.013764624913971095 0.06727664155005382 6 0.0 0.0 7 0.0 0.0 8 0.0 0.0 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.013455328310010764 0.0 22 0.0 0.0 0.0 0.06727664155005382 0.0 23 0.0 0.0 0.0 0.06727664155005382 0.0 24 0.0 0.0 0.0 0.08073196986006459 0.0 25 0.0 0.0 0.0 0.08073196986006459 0.0 26 0.0 0.0 0.0 0.08073196986006459 0.0 27 0.0 0.0 0.0 0.08073196986006459 0.0 28 0.0 0.0 0.0 0.08073196986006459 0.0 29 0.0 0.0 0.0 0.08073196986006459 0.0 30 0.0 0.0 0.0 0.08073196986006459 0.0 31 0.0 0.0 0.0 0.08073196986006459 0.0 32 0.0 0.0 0.0 0.08073196986006459 0.0 33 0.0 0.0 0.0 0.09418729817007535 0.0 34 0.0 0.0 0.0 0.12109795479009688 0.0 35 0.0 0.0 0.0 0.13455328310010764 0.0 36 0.0 0.0 0.0 0.1480086114101184 0.0 37 0.0 0.0 0.0 0.17491926803013993 0.0 38 0.0 0.0 0.0 0.21528525296017223 0.0 39 0.0 0.0 0.0 0.22874058127018299 0.0 40 0.0 0.0 0.0 0.2556512378902045 0.0 41 0.0 0.0 0.0 0.2691065662002153 0.0 42 0.0 0.0 0.0 0.34983853606027987 0.0 43 0.0 0.0 0.0 0.3767491926803014 0.0 44 0.0 0.0 0.0 0.48439181916038754 0.0 45 0.0 0.0 0.0 0.5247578040904198 0.0 46 0.0 0.0 0.0 0.6054897739504844 0.0 47 0.0 0.0 0.0 0.686221743810549 0.0 48 0.0 0.0 0.0 0.7265877287405813 0.0 49 0.0 0.0 0.0 0.8073196986006459 0.0 50 0.0 0.0 0.0 0.8476856835306782 0.0 51 0.0 0.0 0.0 0.9553283100107642 0.0 52 0.0 0.0 0.0 1.036060279870829 0.0 53 0.0 0.0 0.0 1.143702906350915 0.0 54 0.0 0.0 0.0 1.1840688912809472 0.0 55 0.0 0.0 0.0 1.2244348762109796 0.0 56 0.0 0.0 0.0 1.2917115177610334 0.0 57 0.0 0.0 0.0 1.372443487621098 0.0 58 0.0 0.0 0.0 1.3993541442411195 0.0 59 0.0 0.0 0.0 1.547362755651238 0.0 60 0.0 0.0 0.0 1.5877287405812701 0.0 61 0.0 0.0 0.0 1.6280947255113025 0.0 62 0.0 0.0 0.0 1.6819160387513454 0.0 63 0.0 0.0 0.0 1.76264800861141 0.0 64 0.0 0.0 0.0 1.8299246501614639 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAATCA 15 0.0021383327 70.00001 4 CATAATC 20 0.0066835545 52.5 3 >>END_MODULE