##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779702_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 12690 Sequences flagged as poor quality 0 Sequence length 76 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.282505910165483 34.0 32.0 34.0 23.0 34.0 2 29.29684791174153 34.0 27.0 34.0 12.0 34.0 3 28.326319936958235 34.0 23.0 34.0 11.0 34.0 4 31.139243498817965 34.0 32.0 34.0 23.0 34.0 5 30.591095350669818 34.0 32.0 34.0 21.0 34.0 6 33.35027580772262 37.0 34.0 38.0 21.0 38.0 7 34.45949566587864 38.0 34.0 38.0 26.0 38.0 8 33.63940110323089 38.0 34.0 38.0 21.0 38.0 9 35.09795114263199 38.0 36.0 38.0 27.0 38.0 10-11 34.943538219070135 38.0 36.0 38.0 26.5 38.0 12-13 33.641686367218284 37.5 32.0 38.0 21.0 38.0 14-15 33.846926713947994 37.5 34.0 38.0 22.5 38.0 16-17 33.4414499605989 37.5 32.0 38.0 19.0 38.0 18-19 34.05488573680063 37.5 34.0 38.0 23.5 38.0 20-21 32.9644208037825 37.0 30.5 38.0 18.5 38.0 22-23 32.955594956658786 37.5 31.0 38.0 19.0 38.0 24-25 34.462056737588654 37.5 35.0 38.0 25.0 38.0 26-27 32.70307328605201 37.0 30.5 38.0 16.5 38.0 28-29 35.153585500394016 38.0 36.5 38.0 27.0 38.0 30-31 35.516666666666666 38.0 37.0 38.0 31.0 38.0 32-33 35.62490149724192 38.0 37.0 38.0 31.0 38.0 34-35 35.67352245862884 38.0 37.0 38.0 31.0 38.0 36-37 33.40681639085894 38.0 33.0 38.0 18.5 38.0 38-39 31.235657998423957 36.5 26.5 38.0 11.0 38.0 40-41 32.883884948778565 37.0 32.5 38.0 17.0 38.0 42-43 34.02612293144208 37.5 35.0 38.0 19.0 38.0 44-45 35.64215918045706 38.0 37.0 38.0 31.5 38.0 46-47 34.08416075650118 38.0 34.0 38.0 21.5 38.0 48-49 33.578526398739164 37.5 33.5 38.0 18.5 38.0 50-51 31.129472025216707 36.5 26.5 38.0 11.0 38.0 52-53 34.799290780141845 37.5 35.5 38.0 28.5 38.0 54-55 33.873246650906225 37.5 34.0 38.0 19.0 38.0 56-57 34.35252167060678 38.0 35.5 38.0 21.0 38.0 58-59 35.4246256895193 38.0 37.0 38.0 31.0 38.0 60-61 35.823443656422384 38.0 37.0 38.0 32.0 38.0 62-63 35.73999211977935 38.0 37.0 38.0 32.5 38.0 64-65 35.456422379826634 38.0 37.0 38.0 29.5 38.0 66-67 33.139401103230895 37.5 33.5 38.0 16.0 38.0 68-69 33.32427107959023 37.0 33.5 38.0 16.5 38.0 70-71 32.71532702915682 37.0 32.5 38.0 16.0 38.0 72-73 31.34523246650906 36.5 27.0 38.0 11.0 38.0 74-75 34.080102442868395 37.5 35.0 38.0 24.0 38.0 76 34.67911741528763 37.0 36.0 38.0 26.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 7.0 14 19.0 15 58.0 16 66.0 17 86.0 18 118.0 19 111.0 20 114.0 21 91.0 22 79.0 23 73.0 24 80.0 25 83.0 26 104.0 27 151.0 28 173.0 29 239.0 30 299.0 31 450.0 32 660.0 33 986.0 34 1548.0 35 2490.0 36 2977.0 37 1628.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.30260047281324 20.41765169424744 10.37037037037037 34.909377462568955 2 19.09377462568952 19.605988967691097 35.68951930654058 25.6107171000788 3 17.659574468085108 18.51063829787234 32.88416075650118 30.94562647754137 4 12.2301024428684 17.383766745468872 33.766745468873125 36.6193853427896 5 12.261623325453112 30.346729708431834 38.2033096926714 19.188337273443658 6 25.429472025216704 35.37431048069346 17.013396375098502 22.18282111899133 7 26.02836879432624 29.676910953506695 20.62253743104807 23.67218282111899 8 21.56028368794326 32.671394799054376 18.786446020488572 26.98187549251379 9 20.921985815602838 15.760441292356187 19.55082742316785 43.76674546887313 10-11 21.72970843183609 24.74389282899921 27.10795902285264 26.418439716312058 12-13 21.95035460992908 21.56816390858944 28.43577620173365 28.045705279747835 14-15 19.901497241922776 23.774625689519308 24.08589440504334 32.23798266351458 16-17 21.185973207249802 25.78802206461781 26.300236406619387 26.725768321513005 18-19 19.475965327029158 26.970055161544522 26.351457840819542 27.202521670606778 20-21 21.16233254531127 25.508274231678485 27.419227738376673 25.91016548463357 22-23 20.721040189125294 25.65011820330969 27.750197005516153 25.878644602048855 24-25 19.653270291568166 27.490149724192275 25.516154452324663 27.340425531914892 26-27 19.972419227738378 25.65799842395587 28.400315208825848 25.969267139479907 28-29 19.59022852639874 27.383766745468876 26.39873916469661 26.627265563435778 30-31 19.87391646966115 27.190701339637506 26.773049645390074 26.16233254531127 32-33 19.34200157604413 27.253743104806933 26.528762805358554 26.875492513790388 34-35 20.0354609929078 27.28132387706856 26.091410559495664 26.591804570527977 36-37 20.70527974783294 25.799842395587074 28.735224586288417 24.75965327029157 38-39 20.61859732072498 25.200945626477537 31.22931442080378 22.951142631993697 40-41 20.271867612293143 24.692671394799053 26.063829787234045 28.97163120567376 42-43 19.20409771473601 25.744680851063826 26.04018912529551 29.01103230890465 44-45 19.148936170212767 27.013396375098502 27.620173364854217 26.217494089834513 46-47 19.90937746256895 26.24507486209614 27.328605200945628 26.516942474389282 48-49 19.95665878644602 26.836091410559497 27.43104806934594 25.77620173364854 50-51 20.760441292356184 25.236406619385342 29.830575256107174 24.1725768321513 52-53 19.25925925925926 26.717888100866826 27.364066193853425 26.65878644602049 54-55 20.08668242710796 26.93065405831363 27.356185973207246 25.626477541371155 56-57 19.822695035460995 26.970055161544522 27.249802994483847 25.957446808510635 58-59 19.739952718676122 27.442868400315206 26.773049645390074 26.044129235618595 60-61 18.88888888888889 26.85579196217494 27.143420015760437 27.111899133175726 62-63 18.29787234042553 27.324665090622535 27.60441292356186 26.773049645390074 64-65 18.786446020488572 28.179669030732864 27.001576044129234 26.03230890464933 66-67 18.573680063041763 25.413711583924346 25.307328605200947 30.705279747832943 68-69 18.10766078184111 26.525063051702396 25.457124842370742 29.91015132408575 70-71 18.68794326241135 24.83057525610717 25.724980299448386 30.756501182033098 72-73 17.52955082742317 24.822695035460992 24.739952718676122 32.90780141843971 74-75 18.821907013396373 27.395587076438137 26.457840819542948 27.324665090622535 76 19.148936170212767 26.721828211189912 27.39952718676123 26.72970843183609 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.5 15 1.0 16 1.0 17 1.0 18 1.0 19 2.5 20 4.0 21 4.0 22 5.5 23 9.5 24 18.0 25 24.0 26 30.5 27 50.0 28 84.0 29 105.0 30 108.0 31 136.0 32 188.0 33 215.0 34 252.0 35 328.0 36 384.5 37 402.0 38 459.0 39 580.5 40 663.0 41 694.5 42 708.0 43 729.0 44 774.0 45 802.0 46 806.0 47 799.5 48 751.5 49 671.0 50 632.0 51 609.5 52 529.0 53 437.5 54 404.0 55 359.5 56 286.0 57 237.0 58 217.0 59 202.5 60 166.5 61 130.0 62 115.0 63 110.5 64 108.5 65 117.5 66 121.0 67 118.0 68 117.5 69 107.5 70 115.0 71 132.0 72 113.0 73 84.5 74 58.0 75 41.0 76 37.5 77 31.0 78 25.0 79 22.0 80 22.0 81 14.5 82 6.0 83 5.0 84 5.5 85 4.0 86 2.0 87 2.0 88 1.5 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.015760441292356188 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 12690.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 96.67454688731284 #Duplication Level Percentage of deduplicated Percentage of total 1 97.34268014346267 94.10559495665879 2 2.135637430714053 4.1292356185973205 3 0.38311053146397134 1.1111111111111112 4 0.06521030322791001 0.252167060677699 5 0.05705901532442126 0.27580772261623326 6 0.0 0.0 7 0.008151287903488751 0.055161544523246654 8 0.0 0.0 9 0.008151287903488751 0.07092198581560284 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.007880220646178092 0.0 21 0.0 0.0 0.0 0.007880220646178092 0.0 22 0.0 0.0 0.0 0.03152088258471237 0.0 23 0.0 0.0 0.0 0.03152088258471237 0.0 24 0.0 0.0 0.0 0.055161544523246654 0.0 25 0.0 0.0 0.0 0.055161544523246654 0.0 26 0.0 0.0 0.0 0.055161544523246654 0.0 27 0.0 0.0 0.0 0.06304176516942474 0.0 28 0.0 0.0 0.0 0.06304176516942474 0.0 29 0.0 0.0 0.0 0.06304176516942474 0.0 30 0.0 0.0 0.0 0.06304176516942474 0.0 31 0.0 0.0 0.0 0.06304176516942474 0.0 32 0.0 0.0 0.0 0.06304176516942474 0.0 33 0.0 0.0 0.0 0.07092198581560284 0.0 34 0.0 0.0 0.0 0.07880220646178093 0.0 35 0.0 0.0 0.0 0.08668242710795902 0.0 36 0.0 0.0 0.0 0.09456264775413711 0.0 37 0.0 0.0 0.0 0.1182033096926714 0.0 38 0.0 0.0 0.0 0.13396375098502758 0.0 39 0.0 0.0 0.0 0.16548463356973994 0.0 40 0.0 0.0 0.0 0.22064617809298662 0.0 41 0.0 0.0 0.0 0.26792750197005516 0.0 42 0.0 0.0 0.0 0.3624901497241923 0.0 43 0.0 0.0 0.0 0.44129235618597323 0.0 44 0.0 0.0 0.0 0.5358550039401103 0.0 45 0.0 0.0 0.0 0.6304176516942475 0.0 46 0.0 0.0 0.0 0.7092198581560284 0.0 47 0.0 0.0 0.0 0.8195429472025216 0.0 48 0.0 0.0 0.0 0.8747044917257684 0.0 49 0.0 0.0 0.0 0.929866036249015 0.0 50 0.0 0.0 0.0 1.0480693459416863 0.0 51 0.0 0.0 0.0 1.1426319936958236 0.0 52 0.0 0.0 0.0 1.2450748620961387 0.0 53 0.0 0.0 0.0 1.426319936958235 0.0 54 0.0 0.0 0.0 1.615445232466509 0.0 55 0.0 0.0 0.0 1.7257683215130024 0.0 56 0.0 0.0 0.0 1.867612293144208 0.0 57 0.0 0.0 0.0 1.9858156028368794 0.0 58 0.0 0.0 0.0 2.033096926713948 0.0 59 0.0 0.0 0.0 2.19070133963751 0.0 60 0.0 0.0 0.0 2.316784869976359 0.0 61 0.0 0.0 0.0 2.39558707643814 0.0 62 0.0 0.0 0.0 2.5059101654846336 0.0 63 0.0 0.0 0.0 2.624113475177305 0.0 64 0.0 0.0 0.0 2.7501970055161546 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTTCAC 15 0.0021776587 69.97233 8 TATATTT 20 0.0068055824 52.479248 45 ATATTTT 20 0.0068055824 52.479248 46 >>END_MODULE