##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779702_1.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 12690 Sequences flagged as poor quality 0 Sequence length 76 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.03215130023641 34.0 34.0 34.0 31.0 34.0 2 33.259574468085106 34.0 34.0 34.0 32.0 34.0 3 33.29054373522459 34.0 34.0 34.0 33.0 34.0 4 33.39960598896769 34.0 34.0 34.0 34.0 34.0 5 33.33624901497242 34.0 34.0 34.0 34.0 34.0 6 36.582111899133174 38.0 37.0 38.0 34.0 38.0 7 36.62939322301025 38.0 37.0 38.0 34.0 38.0 8 36.15437352245863 38.0 37.0 38.0 34.0 38.0 9 36.08313632781718 38.0 36.0 38.0 32.0 38.0 10-11 36.18234830575256 38.0 37.0 38.0 34.0 38.0 12-13 36.21674546887313 38.0 37.0 38.0 34.0 38.0 14-15 36.21446020488574 38.0 37.0 38.0 34.0 38.0 16-17 36.17635933806147 38.0 37.0 38.0 33.5 38.0 18-19 36.20693459416864 38.0 37.0 38.0 34.0 38.0 20-21 36.16130811662727 38.0 37.0 38.0 33.5 38.0 22-23 35.957013396375096 38.0 36.0 38.0 32.0 38.0 24-25 36.013120567375886 38.0 36.0 38.0 32.0 38.0 26-27 35.91201733648542 38.0 36.0 38.0 31.5 38.0 28-29 35.77352245862884 38.0 36.0 38.0 31.5 38.0 30-31 35.748305752561066 38.0 36.0 38.0 31.0 38.0 32-33 35.730457052797476 38.0 36.0 38.0 31.0 38.0 34-35 35.72163120567376 38.0 36.0 38.0 31.0 38.0 36-37 35.80409771473602 38.0 36.0 38.0 31.5 38.0 38-39 35.79369582348306 38.0 36.0 38.0 31.5 38.0 40-41 35.959771473601265 38.0 36.5 38.0 32.0 38.0 42-43 35.896808510638294 38.0 36.0 38.0 32.0 38.0 44-45 35.810874704491724 38.0 36.0 38.0 31.5 38.0 46-47 35.84448384554767 38.0 36.0 38.0 31.5 38.0 48-49 35.84208037825059 38.0 36.0 38.0 32.0 38.0 50-51 35.8834121355398 38.0 36.0 38.0 32.0 38.0 52-53 35.85973207249803 38.0 36.5 38.0 32.0 38.0 54-55 35.79531126871552 38.0 36.0 38.0 31.5 38.0 56-57 35.763750985027585 38.0 36.0 38.0 31.5 38.0 58-59 35.74503546099291 38.0 36.0 38.0 31.0 38.0 60-61 35.75342789598109 38.0 36.0 38.0 31.0 38.0 62-63 35.68136327817179 38.0 36.0 38.0 31.0 38.0 64-65 35.67139479905437 38.0 36.0 38.0 31.0 38.0 66-67 35.63550039401103 38.0 36.0 38.0 31.0 38.0 68-69 35.52821118991332 38.0 36.0 38.0 31.0 38.0 70-71 35.37021276595745 38.0 36.0 38.0 30.0 38.0 72-73 35.489598108747046 38.0 36.0 38.0 31.0 38.0 74-75 35.4827817178881 38.0 36.0 38.0 31.0 38.0 76 34.36635145784082 37.0 34.0 38.0 25.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 2.0 21 1.0 22 1.0 23 1.0 24 3.0 25 14.0 26 22.0 27 57.0 28 68.0 29 136.0 30 217.0 31 344.0 32 585.0 33 884.0 34 1259.0 35 1805.0 36 2910.0 37 4380.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.46808510638298 21.07171000788022 11.536643026004729 22.92356185973207 2 24.94877856579984 21.37115839243499 33.57762017336485 20.102442868400317 3 22.789598108747043 24.649330181245073 29.79511426319937 22.76595744680851 4 17.163120567375888 18.400315208825845 37.738376674546885 26.69818754925138 5 16.80851063829787 35.1063829787234 34.05043341213554 14.034672970843184 6 33.018124507486206 35.83924349881797 17.84869976359338 13.293932230102442 7 31.66272655634358 28.778565799842397 22.84475965327029 16.713947990543733 8 27.257683215130022 34.8936170212766 19.82663514578408 18.0220646178093 9 27.84869976359338 18.817966903073284 21.300236406619387 32.03309692671395 10-11 28.140267927501974 25.275807722616232 26.97399527186761 19.609929078014186 12-13 28.06146572104019 22.38770685579196 26.871552403467298 22.67927501970055 14-15 26.4381402679275 24.33412135539795 23.400315208825848 25.8274231678487 16-17 26.481481481481485 27.915681639085893 24.692671394799053 20.91016548463357 18-19 25.886524822695034 26.993695823483055 25.717100078802208 21.4026792750197 20-21 24.393223010244284 27.39952718676123 25.57131599684791 22.63593380614657 22-23 25.858944050433415 26.56422379826635 26.237194641449964 21.339637509850277 24-25 25.752561071710005 27.23404255319149 26.587864460204884 20.425531914893615 26-27 25.08668242710796 28.31363278171789 26.710007880220648 19.889676910953508 28-29 24.732072498029943 26.595744680851062 28.38849487785658 20.28368794326241 30-31 25.40977147360126 25.429472025216704 28.455476753349096 20.70527974783294 32-33 23.93617021276596 27.442868400315206 27.64381402679275 20.977147360126082 34-35 25.070921985815602 26.12687155240347 27.828999211977933 20.973207249802993 36-37 25.78408195429472 26.851851851851855 27.143420015760437 20.220646178092984 38-39 25.066981875492512 26.583924349881798 27.608353033884946 20.74074074074074 40-41 24.91331757289204 25.03152088258471 28.975571315996845 21.0795902285264 42-43 25.354609929078016 25.724980299448386 28.703703703703702 20.216706067769895 44-45 25.137903861308114 26.710007880220648 27.698975571315998 20.45311268715524 46-47 25.996847911741526 25.319148936170212 27.624113475177303 21.059889676910952 48-49 25.137903861308114 25.2521670606777 27.907801418439714 21.70212765957447 50-51 24.436564223798264 25.98108747044917 28.447596532702917 21.134751773049647 52-53 24.75177304964539 25.3230890464933 29.590228526398736 20.33490937746257 54-55 24.822695035460992 25.587076438140265 29.09771473601261 20.49251379038613 56-57 25.03940110323089 25.65405831363278 28.246650906225373 21.059889676910952 58-59 25.070921985815602 26.639085894405046 27.85263987391647 20.437352245862883 60-61 25.043341213553976 26.997635933806148 27.671394799054372 20.2876280535855 62-63 23.6327817178881 28.14420803782506 27.631993695823482 20.591016548463354 64-65 23.861308116627267 29.22379826635146 26.489361702127663 20.425531914893615 66-67 24.04255319148936 28.904649330181243 26.851851851851855 20.20094562647754 68-69 23.01024428684003 29.676910953506695 27.249802994483847 20.063041765169427 70-71 23.947990543735227 28.557919621749413 26.481481481481485 21.012608353033883 72-73 24.152876280535853 27.143420015760437 27.206461780929864 21.49724192277384 74-75 23.63672182821119 28.384554767533494 27.064617809298657 20.91410559495666 76 23.814026792750198 27.90386130811663 27.927501970055165 20.354609929078013 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.5 15 0.5 16 1.5 17 3.0 18 4.0 19 7.0 20 11.0 21 13.0 22 15.5 23 25.0 24 39.0 25 46.0 26 53.0 27 62.0 28 86.5 29 109.0 30 124.5 31 167.0 32 260.5 33 327.0 34 340.0 35 374.0 36 405.5 37 416.0 38 465.5 39 606.0 40 770.0 41 826.5 42 810.0 43 829.0 44 843.5 45 842.0 46 845.0 47 777.0 48 669.0 49 616.0 50 603.0 51 525.5 52 394.0 53 306.5 54 273.0 55 266.0 56 233.5 57 184.0 58 160.0 59 143.0 60 108.5 61 94.5 62 98.0 63 99.5 64 98.5 65 102.0 66 117.5 67 127.0 68 117.5 69 103.0 70 100.5 71 103.0 72 103.5 73 85.5 74 63.0 75 59.0 76 59.5 77 48.5 78 34.5 79 32.0 80 31.0 81 20.0 82 10.5 83 11.0 84 8.5 85 6.0 86 3.0 87 0.0 88 0.5 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 12690.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 69.90543735224585 #Duplication Level Percentage of deduplicated Percentage of total 1 76.47390373125916 53.45941686367218 2 14.654492165483035 20.48857368006304 3 4.8359824146094015 10.141843971631205 4 2.0516289031676247 5.736800630417652 5 0.8454514710855596 2.955082742316785 6 0.46218013752677267 1.938534278959811 7 0.2705444707473791 1.3238770685579195 8 0.05636343140570398 0.31520882584712373 9 0.09018149024912638 0.5673758865248227 >10 0.24799909818509752 2.450748620961387 >50 0.011272686281140797 0.6225374310480694 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCCGT 79 0.6225374310480694 No Hit ATACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCCGTCTT 36 0.28368794326241137 RNA PCR Primer, Index 42 (95% over 22bp) CTTTACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCCGTC 24 0.18912529550827423 No Hit GTGTAGGAAGAGGCAGATAAAGAATATTGAGGCGCCATTGGCGTGAAGGT 22 0.17336485421591805 No Hit GGGTGGGGAAGCGAGGTTGACCTGTTAGGGTGAGAAGAATTATTCGAGTG 19 0.14972419227738376 No Hit GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA 16 0.1260835303388495 No Hit GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT 16 0.1260835303388495 No Hit GGGTGTGATAGGTGGCACGGAGAATTTTGGATTCTCAGGGATGGGTTCGA 14 0.11032308904649331 No Hit GTGTAAATGAGTGAGGCAGGAGTCCGAGGAGGTTAGTTGTGGCAATAAAA 13 0.1024428684003152 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.007880220646178092 0.0 19 0.0 0.0 0.0 0.007880220646178092 0.0 20 0.0 0.0 0.0 0.015760441292356184 0.0 21 0.0 0.0 0.0 0.015760441292356184 0.0 22 0.0 0.0 0.0 0.015760441292356184 0.0 23 0.0 0.0 0.0 0.015760441292356184 0.0 24 0.0 0.0 0.0 0.015760441292356184 0.0 25 0.0 0.0 0.0 0.02364066193853428 0.0 26 0.0 0.0 0.0 0.02364066193853428 0.0 27 0.0 0.0 0.0 0.03152088258471237 0.0 28 0.0 0.0 0.0 0.039401103230890466 0.0 29 0.0 0.0 0.0 0.039401103230890466 0.0 30 0.0 0.0 0.0 0.039401103230890466 0.0 31 0.0 0.0 0.0 0.039401103230890466 0.0 32 0.0 0.0 0.0 0.039401103230890466 0.0 33 0.0 0.0 0.0 0.055161544523246654 0.0 34 0.0 0.0 0.0 0.1024428684003152 0.0 35 0.0 0.0 0.0 0.11032308904649331 0.0 36 0.0 0.0 0.0 0.12608353033884948 0.0 37 0.0 0.0 0.0 0.2285263987391647 0.0 38 0.0 0.0 0.0 0.2364066193853428 0.0 39 0.0 0.0 0.0 0.28368794326241137 0.0 40 0.0 0.0 0.0 0.3467297084318361 0.0 41 0.0 0.0 0.0 0.38613081166272656 0.0 42 0.0 0.0 0.0 0.48857368006304175 0.0 43 0.0 0.0 0.0 0.598896769109535 0.0 44 0.0 0.0 0.0 0.6934594168636722 0.0 45 0.0 0.0 0.0 0.8274231678486997 0.0 46 0.0 0.0 0.0 0.9377462568951931 0.0 47 0.0 0.0 0.0 1.095350669818755 0.0 48 0.0 0.0 0.0 1.2135539795114263 0.0 49 0.0 0.0 0.0 1.3238770685579195 0.0 50 0.0 0.0 0.0 1.4893617021276595 0.0 51 0.0 0.0 0.0 1.5839243498817968 0.0 52 0.0 0.0 0.0 1.7415287628053586 0.0 53 0.0 0.0 0.0 1.9148936170212767 0.0 54 0.0 0.0 0.0 2.0724980299448386 0.0 55 0.0 0.0 0.0 2.2379826635145785 0.0 56 0.0 0.0 0.0 2.4271079590228526 0.0 57 0.0 0.0 0.0 2.5847123719464147 0.0 58 0.0 0.0 0.0 2.710795902285264 0.0 59 0.0 0.0 0.0 2.9078014184397163 0.0 60 0.0 0.0 0.0 3.120567375886525 0.0 61 0.0 0.0 0.0 3.2781717888100865 0.0 62 0.0 0.0 0.0 3.4988179669030735 0.0 63 0.0 0.0 0.0 3.632781717888101 0.0 64 0.0 0.0 0.0 3.892828999211978 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCTGAG 15 0.0021742468 70.00001 37 TAAGTAG 15 0.0021742468 70.00001 17 GAAAAAA 65 7.5303926E-4 26.923077 57 AAAAAAA 290 2.7927806E-4 10.862069 62 >>END_MODULE