##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779699_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1860 Sequences flagged as poor quality 0 Sequence length 76 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.203225806451613 33.0 23.0 34.0 12.0 34.0 2 27.205376344086023 32.0 23.0 34.0 12.0 34.0 3 26.573118279569893 32.0 21.0 34.0 11.0 34.0 4 28.397849462365592 34.0 23.0 34.0 12.0 34.0 5 27.81290322580645 34.0 23.0 34.0 11.0 34.0 6 29.741397849462366 35.0 23.0 38.0 11.0 38.0 7 31.195698924731182 37.0 26.0 38.0 12.0 38.0 8 30.239247311827956 36.0 24.0 38.0 11.0 38.0 9 32.026881720430104 37.0 28.0 38.0 12.0 38.0 10-11 31.388172043010755 37.0 27.0 38.0 11.0 38.0 12-13 30.627150537634407 35.5 27.0 38.0 11.0 38.0 14-15 30.421505376344086 36.0 24.5 38.0 11.0 38.0 16-17 30.352150537634408 35.5 25.0 38.0 11.0 38.0 18-19 30.843548387096774 36.5 26.0 38.0 11.5 38.0 20-21 29.740860215053765 35.5 23.5 38.0 11.0 38.0 22-23 30.1247311827957 35.5 24.5 38.0 11.0 38.0 24-25 31.104032258064514 36.5 26.5 38.0 11.0 38.0 26-27 29.508602150537634 35.0 22.0 38.0 11.0 38.0 28-29 31.29462365591398 37.0 26.5 38.0 11.0 38.0 30-31 31.84193548387097 37.5 28.5 38.0 11.0 38.0 32-33 32.013172043010755 38.0 31.0 38.0 11.0 38.0 34-35 32.05241935483871 38.0 31.0 38.0 11.0 38.0 36-37 30.218548387096774 36.5 24.0 38.0 11.0 38.0 38-39 28.77768817204301 34.0 21.5 37.5 11.0 38.0 40-41 29.21478494623656 34.0 22.0 37.5 11.0 38.0 42-43 30.51102150537634 36.5 25.0 38.0 11.0 38.0 44-45 31.747580645161293 37.0 27.0 38.0 11.0 38.0 46-47 30.591397849462368 36.0 24.5 38.0 11.0 38.0 48-49 29.916129032258063 35.5 23.5 38.0 11.0 38.0 50-51 27.976881720430107 33.5 21.0 37.5 11.0 38.0 52-53 30.92231182795699 36.5 26.0 38.0 11.0 38.0 54-55 29.9997311827957 35.5 24.0 38.0 11.0 38.0 56-57 30.425806451612903 36.5 24.5 38.0 11.0 38.0 58-59 31.398118279569893 37.0 26.5 38.0 11.0 38.0 60-61 31.943279569892475 38.0 29.0 38.0 11.0 38.0 62-63 31.987903225806452 37.5 29.0 38.0 11.0 38.0 64-65 31.7497311827957 37.5 27.5 38.0 11.0 38.0 66-67 29.803494623655915 35.5 23.5 38.0 11.0 38.0 68-69 29.836559139784946 36.0 23.0 38.0 11.0 38.0 70-71 29.313709677419354 35.0 22.5 38.0 11.0 38.0 72-73 28.326075268817206 34.0 21.0 37.5 11.0 38.0 74-75 30.07715053763441 35.5 24.0 38.0 11.0 38.0 76 30.259677419354837 36.0 24.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 8.0 14 10.0 15 36.0 16 32.0 17 52.0 18 61.0 19 71.0 20 55.0 21 65.0 22 34.0 23 23.0 24 35.0 25 29.0 26 42.0 27 31.0 28 39.0 29 28.0 30 59.0 31 68.0 32 67.0 33 137.0 34 165.0 35 247.0 36 315.0 37 150.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.881720430107528 19.193548387096772 12.956989247311828 35.96774193548387 2 20.161290322580644 15.053763440860216 39.247311827956985 25.537634408602152 3 21.29032258064516 14.946236559139786 35.43010752688172 28.333333333333332 4 15.96774193548387 18.225806451612904 28.763440860215056 37.04301075268817 5 16.612903225806452 24.247311827956988 36.98924731182795 22.1505376344086 6 27.956989247311824 32.903225806451616 13.38709677419355 25.75268817204301 7 26.82795698924731 24.946236559139784 17.634408602150536 30.591397849462364 8 22.795698924731184 32.795698924731184 16.881720430107528 27.526881720430108 9 21.29032258064516 14.89247311827957 19.408602150537636 44.40860215053763 10-11 24.56989247311828 21.236559139784948 26.801075268817204 27.392473118279568 12-13 23.655913978494624 17.446236559139784 28.655913978494624 30.241935483870968 14-15 24.327956989247312 21.344086021505376 22.822580645161292 31.505376344086024 16-17 25.967741935483872 20.188172043010752 24.327956989247312 29.516129032258064 18-19 22.63440860215054 20.161290322580644 27.688172043010752 29.516129032258064 20-21 26.263440860215052 19.946236559139784 25.483870967741932 28.306451612903228 22-23 26.666666666666668 19.35483870967742 24.677419354838708 29.301075268817208 24-25 22.903225806451612 22.876344086021504 21.20967741935484 33.01075268817204 26-27 24.838709677419356 22.526881720430108 25.376344086021508 27.258064516129032 28-29 24.48924731182796 21.397849462365592 24.56989247311828 29.54301075268817 30-31 23.225806451612904 23.010752688172044 24.032258064516128 29.731182795698924 32-33 23.306451612903224 22.043010752688172 24.704301075268816 29.946236559139784 34-35 23.844086021505376 22.93010752688172 22.526881720430108 30.698924731182796 36-37 24.704301075268816 20.7258064516129 28.763440860215056 25.806451612903224 38-39 25.134408602150536 18.064516129032256 32.93010752688172 23.870967741935484 40-41 25.026881720430104 21.774193548387096 23.172043010752688 30.02688172043011 42-43 22.016129032258064 22.983870967741936 25.053763440860216 29.946236559139784 44-45 20.887096774193548 20.77956989247312 27.365591397849464 30.967741935483872 46-47 24.193548387096776 21.155913978494624 26.344086021505376 28.306451612903228 48-49 25.403225806451612 21.20967741935484 26.424731182795696 26.96236559139785 50-51 29.408602150537632 19.301075268817204 27.500000000000004 23.790322580645164 52-53 20.376344086021504 20.7258064516129 28.413978494623652 30.483870967741932 54-55 25.403225806451612 21.182795698924732 23.306451612903224 30.107526881720432 56-57 25.430107526881716 21.29032258064516 24.543010752688172 28.736559139784944 58-59 21.102150537634408 24.731182795698924 24.6505376344086 29.516129032258064 60-61 23.091397849462368 20.026881720430108 25.349462365591396 31.532258064516128 62-63 21.263440860215056 22.661290322580648 25.349462365591396 30.725806451612904 64-65 21.344086021505376 24.35483870967742 24.35483870967742 29.946236559139784 66-67 20.56451612903226 27.043010752688172 20.483870967741936 31.908602150537636 68-69 21.532258064516128 26.63978494623656 20.698924731182796 31.129032258064516 70-71 20.080645161290324 25.99462365591398 21.048387096774192 32.876344086021504 72-73 18.629032258064516 26.129032258064516 21.021505376344084 34.22043010752688 74-75 20.77956989247312 25.913978494623656 21.908602150537636 31.397849462365592 76 19.946236559139784 24.89247311827957 22.419354838709676 32.74193548387097 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 1.0 20 2.0 21 2.0 22 4.5 23 7.5 24 8.5 25 9.0 26 10.5 27 11.5 28 10.5 29 10.0 30 13.5 31 21.5 32 27.5 33 29.0 34 31.5 35 35.5 36 40.0 37 43.0 38 47.0 39 52.5 40 52.5 41 57.0 42 63.0 43 66.0 44 61.5 45 59.5 46 65.0 47 70.5 48 68.0 49 57.0 50 54.0 51 56.0 52 62.5 53 70.0 54 73.0 55 56.0 56 47.0 57 53.5 58 52.0 59 48.0 60 47.5 61 54.0 62 57.0 63 45.5 64 45.5 65 50.0 66 52.5 67 62.0 68 54.0 69 45.0 70 41.5 71 39.0 72 44.0 73 41.5 74 34.5 75 35.0 76 29.0 77 22.5 78 16.5 79 11.0 80 10.0 81 7.0 82 4.0 83 3.0 84 3.0 85 2.0 86 0.5 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 1860.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 99.6236559139785 #Duplication Level Percentage of deduplicated Percentage of total 1 99.62223421478683 99.24731182795699 2 0.37776578521316784 0.7526881720430108 3 0.0 0.0 4 0.0 0.0 5 0.0 0.0 6 0.0 0.0 7 0.0 0.0 8 0.0 0.0 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGCCGATCTTGGTGATGCGGGTGTAGCCGCCGTTGCGCTCGGCCATCGCG 2 0.10752688172043011 No Hit CCCTTGGGTTTCTAAAGTCTATAAAAAGCACTAAGTGAAGATAATAGCAA 2 0.10752688172043011 No Hit GTGTGCCGGAAGCTCGTCCAGTCGGGACGCAGGGCCACCACCAGCGTGTC 2 0.10752688172043011 No Hit GCTCCACGGACCGTCCCGGTCCGCGATCCTCGAGGTCGCGGCTGTCTCTT 2 0.10752688172043011 No Hit GCATTTAAACAAGTGTTCAAAGTTTACATAGCTAATATGAGACAAATGAT 2 0.10752688172043011 No Hit ACATTACAGCAACATTTGCTAGAGGTAGAAAAATTAACATTAAGTAAATA 2 0.10752688172043011 No Hit GCCACTGGAGGCAAACACACGCAGAGCCCAGAGACAGTGGAGGAGCTGCT 2 0.10752688172043011 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.053763440860215055 0.0 15 0.0 0.0 0.0 0.053763440860215055 0.0 16 0.0 0.0 0.0 0.053763440860215055 0.0 17 0.0 0.0 0.0 0.053763440860215055 0.0 18 0.0 0.0 0.0 0.053763440860215055 0.0 19 0.0 0.0 0.0 0.053763440860215055 0.0 20 0.0 0.0 0.0 0.053763440860215055 0.0 21 0.0 0.0 0.0 0.053763440860215055 0.0 22 0.0 0.0 0.0 0.16129032258064516 0.0 23 0.0 0.0 0.0 0.21505376344086022 0.0 24 0.0 0.0 0.0 0.21505376344086022 0.0 25 0.0 0.0 0.0 0.21505376344086022 0.0 26 0.0 0.0 0.0 0.21505376344086022 0.0 27 0.0 0.0 0.0 0.21505376344086022 0.0 28 0.0 0.0 0.0 0.21505376344086022 0.0 29 0.0 0.0 0.0 0.21505376344086022 0.0 30 0.0 0.0 0.0 0.21505376344086022 0.0 31 0.0 0.0 0.0 0.21505376344086022 0.0 32 0.0 0.0 0.0 0.26881720430107525 0.0 33 0.0 0.0 0.0 0.26881720430107525 0.0 34 0.0 0.0 0.0 0.26881720430107525 0.0 35 0.0 0.0 0.0 0.4838709677419355 0.0 36 0.0 0.0 0.0 0.5376344086021505 0.0 37 0.0 0.0 0.0 0.6451612903225806 0.0 38 0.0 0.0 0.0 0.7526881720430108 0.0 39 0.0 0.0 0.0 0.8064516129032258 0.0 40 0.0 0.0 0.0 0.9139784946236559 0.0 41 0.0 0.0 0.0 1.075268817204301 0.0 42 0.0 0.0 0.0 1.2365591397849462 0.0 43 0.0 0.0 0.0 1.5591397849462365 0.0 44 0.0 0.0 0.0 1.7204301075268817 0.0 45 0.0 0.0 0.0 1.8279569892473118 0.0 46 0.0 0.0 0.0 1.935483870967742 0.0 47 0.0 0.0 0.0 1.989247311827957 0.0 48 0.0 0.0 0.0 2.043010752688172 0.0 49 0.0 0.0 0.0 2.2580645161290325 0.0 50 0.0 0.0 0.0 2.3118279569892475 0.0 51 0.0 0.0 0.0 2.3118279569892475 0.0 52 0.0 0.0 0.0 2.3118279569892475 0.0 53 0.0 0.0 0.0 2.4731182795698925 0.0 54 0.0 0.0 0.0 2.6344086021505375 0.0 55 0.0 0.0 0.0 2.849462365591398 0.0 56 0.0 0.0 0.0 2.903225806451613 0.0 57 0.0 0.0 0.0 3.118279569892473 0.0 58 0.0 0.0 0.0 3.172043010752688 0.0 59 0.0 0.0 0.0 3.3333333333333335 0.0 60 0.0 0.0 0.0 3.4946236559139785 0.0 61 0.0 0.0 0.0 3.4946236559139785 0.0 62 0.0 0.0 0.0 3.6559139784946235 0.0 63 0.0 0.0 0.0 3.6559139784946235 0.0 64 0.0 0.0 0.0 3.7096774193548385 0.0 >>END_MODULE >>Kmer Content pass >>END_MODULE