##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779698_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 18149 Sequences flagged as poor quality 0 Sequence length 76 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.82235935864235 34.0 32.0 34.0 21.0 34.0 2 28.87123257479751 34.0 24.0 34.0 12.0 34.0 3 27.792109758113394 34.0 23.0 34.0 11.0 34.0 4 30.695410215438866 34.0 32.0 34.0 23.0 34.0 5 30.15549066064246 34.0 31.0 34.0 11.0 34.0 6 32.74323654195823 37.0 33.0 38.0 12.0 38.0 7 33.61446911675574 37.0 34.0 38.0 21.0 38.0 8 33.050856796517714 37.0 34.0 38.0 12.0 38.0 9 34.5259242933495 38.0 34.0 38.0 26.0 38.0 10-11 34.38845115433357 38.0 35.0 38.0 24.0 38.0 12-13 33.102732932943965 37.5 31.5 38.0 19.0 38.0 14-15 33.360653479530555 37.0 33.5 38.0 21.0 38.0 16-17 32.87296820761475 37.5 31.5 38.0 18.5 38.0 18-19 33.61119069921208 37.0 34.0 38.0 22.0 38.0 20-21 32.47779491983029 37.0 30.5 38.0 17.5 38.0 22-23 32.37588847870406 37.0 29.5 38.0 18.0 38.0 24-25 33.9736900104689 37.0 34.5 38.0 24.0 38.0 26-27 32.118353628299076 37.0 30.5 38.0 16.0 38.0 28-29 34.70979117306739 37.5 35.0 38.0 26.5 38.0 30-31 35.22568736569508 38.0 36.5 38.0 27.0 38.0 32-33 35.248223042591874 38.0 37.0 38.0 27.0 38.0 34-35 35.30974158355832 38.0 37.0 38.0 27.0 38.0 36-37 32.880874979337705 37.0 30.5 38.0 17.0 38.0 38-39 30.6865943027164 36.5 26.0 38.0 11.0 38.0 40-41 32.316794313736295 36.5 30.5 38.0 16.0 38.0 42-43 33.54892831560967 37.0 33.0 38.0 18.5 38.0 44-45 35.26566201994601 38.0 36.5 38.0 28.0 38.0 46-47 33.72271199515125 37.5 32.0 38.0 21.0 38.0 48-49 33.182819990082095 37.0 32.0 38.0 18.5 38.0 50-51 30.521598986170037 36.0 25.0 38.0 11.0 38.0 52-53 34.4640476059287 37.0 35.0 38.0 25.5 38.0 54-55 33.49286462064026 37.5 33.0 38.0 18.5 38.0 56-57 33.93655297812552 37.5 34.0 38.0 19.0 38.0 58-59 35.13295498374566 38.0 36.5 38.0 28.0 38.0 60-61 35.52909251198413 38.0 37.0 38.0 31.0 38.0 62-63 35.40845225632266 38.0 37.0 38.0 29.0 38.0 64-65 35.15419582346135 38.0 36.5 38.0 27.5 38.0 66-67 32.767783348944846 37.5 32.5 38.0 11.0 38.0 68-69 32.7729626976693 37.0 32.5 38.0 16.0 38.0 70-71 32.255936966224034 37.0 30.0 38.0 15.5 38.0 72-73 30.89925064741859 36.5 26.0 38.0 11.0 38.0 74-75 33.65022866273624 37.0 33.0 38.0 24.0 38.0 76 34.2551104744063 37.0 34.0 38.0 25.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 10.0 14 41.0 15 80.0 16 85.0 17 129.0 18 168.0 19 159.0 20 164.0 21 135.0 22 145.0 23 160.0 24 147.0 25 188.0 26 220.0 27 239.0 28 310.0 29 413.0 30 553.0 31 766.0 32 1097.0 33 1732.0 34 2487.0 35 3289.0 36 3684.0 37 1748.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 38.81756570609951 19.455617389387843 14.380957628519479 27.345859275993167 2 19.885393134607966 19.747644498319467 37.51170863408452 22.855253732988043 3 20.01763182544493 20.09477106176649 34.86693481734531 25.020662295443273 4 12.689404374896688 18.403217808143697 36.84500523444818 32.062372582511436 5 11.774753429941045 32.238690836960714 40.21709185079067 15.769463882307566 6 26.199790622072843 35.75954598049479 18.078131026502838 19.962532370929527 7 25.918783404044298 28.640696457105076 22.348338751446363 23.092181387404263 8 21.703675133616176 34.38756956306133 19.681525152900985 24.227230150421512 9 22.68995536944184 16.788803790842472 21.025951843076754 39.495288996638934 10-11 23.296049369111245 24.957297922750566 28.249490330045735 23.497162378092458 12-13 22.758829687586093 22.10039120612706 30.059507410876634 25.08127169541022 14-15 22.031516887982807 24.11427626866494 24.57160174114276 29.282605102209487 16-17 22.871783569342664 25.8085844950135 27.632376439473248 23.687255496170586 18-19 20.9570775249325 26.57446691277756 28.155821257369553 24.31263430492038 20-21 22.43374290594523 25.513802413356107 27.976748030194504 24.075706650504163 22-23 22.877293514794204 24.59364152294892 28.87486913879553 23.654195823461347 24-25 20.053446470879937 27.486362885007438 26.995977739820376 25.46421290429225 26-27 20.640255661468952 26.265909967491325 29.089757011405588 24.00407735963414 28-29 20.4887321615516 27.070362003416164 28.621411648024687 23.819494187007546 30-31 20.58515620695355 27.180560912446968 28.571822138960822 23.662460741638657 32-33 20.53556669788969 27.822469557551383 27.310044630558156 24.331919114000772 34-35 21.463992506474185 26.560692049148717 27.635131412199023 24.34018403217808 36-37 22.09488126067552 25.263099895311036 29.946553529120063 22.695465314893383 38-39 21.623780924568848 25.026172240894816 32.690506363987 20.65954047054934 40-41 20.731169761419363 25.74797509504656 26.849964185354562 26.670890958179516 42-43 19.684280125626756 27.070362003416164 27.092401785222325 26.15295608573475 44-45 19.824783734641027 27.387183866879717 27.943688357485264 24.84434404099399 46-47 21.202270097526036 25.896743622238137 29.089757011405588 23.81122926883024 48-49 21.687145297261555 26.579976858229102 28.574577111686594 23.158300732822745 50-51 22.965452642018843 24.786489613752824 30.373574301614415 21.87448344261392 52-53 20.62923577056587 26.880268885338037 28.235715466416885 24.254779877679212 54-55 21.312469006556835 26.582731830954877 28.536007493525815 23.568791668962476 56-57 20.88820320678825 26.533142321891013 27.73155545760097 24.847099013719763 58-59 20.565871397873163 27.268720039671607 27.81695961209984 24.34844895035539 60-61 20.02865171634801 27.130971403383107 28.365199184528073 24.47517769574081 62-63 19.188385034988155 27.52217753044245 27.93542343930795 25.354013995261447 64-65 20.794534134112073 28.114496666483003 27.285249876026228 23.8057193233787 66-67 19.27929913493856 26.560692049148717 25.76725990412695 28.392748911785777 68-69 18.15577044934843 27.297021792434638 26.988456346254512 27.558751411962422 70-71 18.981762080555402 26.910573585321508 26.22458537660477 27.88307895751832 72-73 18.75309934431649 25.80307454956196 25.163920877183315 30.27990522893823 74-75 19.441842525758997 28.10347677557992 27.246680257865446 25.208000440795637 76 19.753154443771006 27.924403548404868 27.68747589398865 24.634966113835475 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.5 7 0.5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.5 16 1.5 17 2.0 18 2.5 19 4.5 20 6.5 21 7.0 22 10.5 23 23.5 24 41.0 25 49.0 26 49.0 27 69.5 28 111.0 29 132.0 30 156.5 31 232.0 32 307.5 33 332.0 34 392.0 35 500.0 36 621.0 37 694.0 38 754.5 39 890.5 40 1002.0 41 1092.5 42 1147.0 43 1181.0 44 1227.5 45 1226.0 46 1212.0 47 1169.0 48 1086.5 49 988.0 50 929.0 51 881.5 52 755.5 53 615.0 54 553.0 55 503.0 56 387.0 57 281.0 58 241.0 59 229.5 60 181.0 61 138.0 62 132.0 63 118.5 64 101.5 65 93.0 66 92.5 67 97.0 68 90.5 69 87.5 70 83.0 71 75.0 72 76.0 73 78.0 74 61.5 75 44.0 76 37.5 77 30.5 78 24.0 79 18.0 80 17.0 81 14.5 82 10.0 83 7.0 84 5.5 85 4.5 86 3.0 87 1.0 88 0.5 89 0.0 90 0.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.002754972725770015 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 18149.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 96.87586092897679 #Duplication Level Percentage of deduplicated Percentage of total 1 97.4633147537254 94.41842525758996 2 2.0589238994426116 3.9892005069149814 3 0.3469457399613241 1.0083200176318254 4 0.08531452621999773 0.3305967270924018 5 0.02843817540666591 0.13774863628850076 6 0.005687635081333181 0.03305967270924018 7 0.005687635081333181 0.03856961816078021 8 0.005687635081333181 0.04407956361232024 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.01101989090308006 0.0 10 0.0 0.0 0.0 0.01101989090308006 0.0 11 0.0 0.0 0.0 0.01101989090308006 0.0 12 0.0 0.0 0.0 0.01101989090308006 0.0 13 0.0 0.0 0.0 0.01101989090308006 0.0 14 0.0 0.0 0.0 0.01101989090308006 0.0 15 0.0 0.0 0.0 0.01101989090308006 0.0 16 0.0 0.0 0.0 0.01101989090308006 0.0 17 0.0 0.0 0.0 0.01101989090308006 0.0 18 0.0 0.0 0.0 0.01101989090308006 0.0 19 0.0 0.0 0.0 0.01652983635462009 0.0 20 0.0 0.0 0.0 0.01652983635462009 0.0 21 0.0 0.0 0.0 0.01652983635462009 0.0 22 0.0 0.0 0.0 0.02754972725770015 0.0 23 0.0 0.0 0.0 0.02754972725770015 0.0 24 0.0 0.0 0.0 0.03856961816078021 0.0 25 0.0 0.0 0.0 0.04407956361232024 0.0 26 0.0 0.0 0.0 0.04407956361232024 0.0 27 0.0 0.0 0.0 0.04407956361232024 0.0 28 0.0 0.0 0.0 0.04407956361232024 0.0 29 0.0 0.0 0.0 0.04407956361232024 0.0 30 0.0 0.0 0.0 0.0550994545154003 0.0 31 0.0 0.0 0.0 0.0550994545154003 0.0 32 0.0 0.0 0.0 0.0550994545154003 0.0 33 0.0 0.0 0.0 0.06060939996694033 0.0 34 0.0 0.0 0.0 0.06060939996694033 0.0 35 0.0 0.0 0.0 0.06611934541848036 0.0 36 0.0 0.0 0.0 0.06611934541848036 0.0 37 0.0 0.0 0.0 0.07713923632156042 0.0 38 0.0 0.0 0.0 0.10468896357926057 0.0 39 0.0 0.0 0.0 0.14325858174004077 0.0 40 0.0 0.0 0.0 0.19284809080390103 0.0 41 0.0 0.0 0.0 0.2589674362223814 0.0 42 0.0 0.0 0.0 0.33610667254394183 0.0 43 0.0 0.0 0.0 0.39671607251088215 0.0 44 0.0 0.0 0.0 0.4793652542839826 0.0 45 0.0 0.0 0.0 0.49589509063860265 0.0 46 0.0 0.0 0.0 0.562014436057083 0.0 47 0.0 0.0 0.0 0.6281337814755634 0.0 48 0.0 0.0 0.0 0.6832332359909636 0.0 49 0.0 0.0 0.0 0.7162929087002039 0.0 50 0.0 0.0 0.0 0.7989420904733043 0.0 51 0.0 0.0 0.0 0.8926111631494849 0.0 52 0.0 0.0 0.0 1.0413796903410657 0.0 53 0.0 0.0 0.0 1.2066780538872666 0.0 54 0.0 0.0 0.0 1.311367017466527 0.0 55 0.0 0.0 0.0 1.4160559810457876 0.0 56 0.0 0.0 0.0 1.5152349991735081 0.0 57 0.0 0.0 0.0 1.6199239627527688 0.0 58 0.0 0.0 0.0 1.7025731445258692 0.0 59 0.0 0.0 0.0 1.82379194445975 0.0 60 0.0 0.0 0.0 1.86787150807207 0.0 61 0.0 0.0 0.0 1.9284809080390104 0.0 62 0.0 0.0 0.0 1.9890903080059508 0.0 63 0.0 0.0 0.0 2.033169871618271 0.0 64 0.0 0.0 0.0 2.0937792715852113 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACAAA 15 0.0021895969 70.0 51 GAGGCAT 20 7.720024E-5 70.0 19 CCTACGA 20 7.720024E-5 70.0 47 GGCATAA 15 0.0021895969 70.0 21 AACTGTC 15 0.0021895969 70.0 59 TATGTTC 15 0.0021895969 70.0 51 CAACTAT 15 0.0021895969 70.0 10 TATAACA 20 7.720024E-5 70.0 29 CGTGGTA 15 0.0021895969 70.0 7 ATAACAA 15 0.0021895969 70.0 30 TCGCTCA 15 0.0021895969 70.0 69 GCTAAGC 20 7.720024E-5 70.0 8 GACAAAC 15 0.0021895969 70.0 52 TACGACA 15 0.0021895969 70.0 49 AGGCATA 20 7.720024E-5 70.0 20 ACGACAA 20 7.720024E-5 70.0 50 CGATGAG 15 0.0021895969 70.0 18 TAGCGTG 15 0.0021895969 70.0 4 AAACAGA 25 2.3285033E-4 56.000004 55 TTATAAC 25 2.3285033E-4 56.000004 28 >>END_MODULE