##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779696_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 11957 Sequences flagged as poor quality 0 Sequence length 76 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.106297566279167 34.0 32.0 34.0 23.0 34.0 2 29.29020657355524 34.0 27.0 34.0 12.0 34.0 3 28.217027682529064 34.0 23.0 34.0 11.0 34.0 4 31.079535000418165 34.0 32.0 34.0 23.0 34.0 5 30.486326001505393 34.0 32.0 34.0 21.0 34.0 6 33.33687379777536 37.0 34.0 38.0 21.0 38.0 7 34.328594128962116 38.0 34.0 38.0 26.0 38.0 8 33.704190014217616 38.0 34.0 38.0 21.0 38.0 9 34.966797691728694 38.0 36.0 38.0 27.0 38.0 10-11 34.750397256837005 38.0 36.0 38.0 25.5 38.0 12-13 33.419628669398676 37.5 32.0 38.0 19.0 38.0 14-15 33.70055197792088 37.5 34.0 38.0 22.5 38.0 16-17 33.34264447603914 37.5 31.5 38.0 19.0 38.0 18-19 33.93438989713138 37.5 34.0 38.0 22.5 38.0 20-21 32.87697583005771 37.0 30.5 38.0 18.5 38.0 22-23 32.82332524880823 37.5 31.0 38.0 18.5 38.0 24-25 34.32508154219286 37.5 35.0 38.0 24.5 38.0 26-27 32.666429706448106 37.0 30.5 38.0 16.5 38.0 28-29 35.04378188508824 38.0 36.5 38.0 27.0 38.0 30-31 35.35853474951911 38.0 37.0 38.0 29.0 38.0 32-33 35.48005352513172 38.0 37.0 38.0 31.0 38.0 34-35 35.529355189428784 38.0 37.0 38.0 31.0 38.0 36-37 33.30743497532826 38.0 32.5 38.0 17.5 38.0 38-39 31.159739064982855 36.5 26.5 38.0 11.0 38.0 40-41 32.79957347160659 37.0 32.5 38.0 16.5 38.0 42-43 33.91611608262942 37.5 34.5 38.0 19.0 38.0 44-45 35.511708622564186 38.0 37.0 38.0 31.0 38.0 46-47 33.97838086476541 38.0 34.0 38.0 21.0 38.0 48-49 33.5206155390148 37.5 33.5 38.0 18.5 38.0 50-51 30.983858827465085 36.5 26.0 38.0 11.0 38.0 52-53 34.675252989880406 37.5 35.5 38.0 26.0 38.0 54-55 33.79208831646734 37.5 34.0 38.0 19.0 38.0 56-57 34.19917203311867 38.0 35.5 38.0 19.5 38.0 58-59 35.29890440746007 38.0 36.5 38.0 29.0 38.0 60-61 35.619469766663876 38.0 37.0 38.0 31.0 38.0 62-63 35.55398511332274 38.0 37.0 38.0 30.5 38.0 64-65 35.25499707284436 38.0 37.0 38.0 28.0 38.0 66-67 33.18286359454713 37.5 34.0 38.0 16.0 38.0 68-69 33.27669984109727 37.5 34.0 38.0 16.0 38.0 70-71 32.68951241950322 37.0 32.5 38.0 16.0 38.0 72-73 31.487998661871707 36.5 27.0 38.0 11.0 38.0 74-75 33.979760809567615 37.5 34.5 38.0 24.0 38.0 76 34.58124947729364 37.0 36.0 38.0 25.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 12.0 14 30.0 15 66.0 16 79.0 17 103.0 18 113.0 19 115.0 20 102.0 21 85.0 22 89.0 23 76.0 24 84.0 25 83.0 26 112.0 27 125.0 28 167.0 29 202.0 30 284.0 31 383.0 32 573.0 33 925.0 34 1497.0 35 2218.0 36 2776.0 37 1656.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.814000167266038 23.89395333277578 13.030024253575313 31.26202224638287 2 17.63820356276658 17.7469264865769 40.94672576733294 23.668144183323577 3 16.74333026678933 19.645396002341727 35.07568788157565 28.535585849293298 4 11.524629923893952 19.059964874132305 36.305093250815425 33.110311951158316 5 11.332273981768003 33.637199966546795 39.18206908087313 15.848456970812078 6 24.02776616208079 36.33854645814167 17.972735636029107 21.660951743748434 7 23.684870786986703 28.88684452621895 23.701597390649827 23.72668729614452 8 19.09341808145856 35.21786401271222 19.92974826461487 25.758969641214353 9 20.398093167182406 15.112486409634524 21.97039391151627 42.51902651166681 10-11 21.65677009283265 25.94714393242452 28.535585849293298 23.860500125449526 12-13 21.422597641548883 22.334197541189262 28.957932591787237 27.285272225474618 14-15 20.598812411139917 24.663377101279586 24.466839508237854 30.270970979342643 16-17 21.159153633854647 26.214769591034543 27.147277745253827 25.478799029856987 18-19 20.159739064982855 26.599481475286442 27.226729112653675 26.014050347077028 20-21 20.782805051434305 26.528393409718156 27.465083214853227 25.223718323994316 22-23 21.43932424521201 25.227899974910095 28.196872125114997 25.1359036547629 24-25 19.17286944885841 27.628167600568705 26.99255666136991 26.206406289202977 26-27 19.377770343731704 25.855147612277328 28.93284268629255 25.83423935769842 28-29 19.783390482562517 27.983607928410137 27.47762816760057 24.75537342142678 30-31 19.540854729447187 27.582169440495107 26.796019068328174 26.080956761729528 32-33 19.40704190014218 27.406540102032285 27.009283265033034 26.177134732792506 34-35 20.163920715898637 27.005101614117255 27.005101614117255 25.825876055866857 36-37 20.858074767918374 25.236263276741656 29.434640796186333 24.471021159153633 38-39 20.728443589529146 24.68010370494271 32.048172618549806 22.54328008697834 40-41 19.30668227816342 26.055866856234843 26.461486995065652 28.175963870536087 42-43 18.487078698670235 26.612026428033786 27.26436397089571 27.63653090240027 44-45 18.829974073764323 27.778707033536843 27.494354771263694 25.896964121435147 46-47 20.481726185498033 26.13949987455047 27.782888684452622 25.595885255498874 48-49 20.352095007108804 26.256586100192358 28.485406038303925 24.905912854394916 50-51 21.95784895876892 25.06063393827883 29.61027013464916 23.371246968303087 52-53 19.68303086058376 27.904156561010286 27.297817178221962 25.114995400183993 54-55 20.31027849795099 27.327088734632433 27.360541941958683 25.00209082545789 56-57 20.84552981517103 26.361127373086894 27.306180480053527 25.487162331688552 58-59 19.273229070837168 27.908338211926072 27.770343731705278 25.048088985531486 60-61 19.7875721334783 26.11022831814 28.301413398009533 25.80078615037217 62-63 17.76783474115581 27.75361712804215 28.297231747093754 26.181316383708285 64-65 19.80011708622564 28.242870285188594 26.796019068328174 25.160993560257587 66-67 18.332357614786318 25.98059713975077 25.223718323994316 30.463326921468596 68-69 18.06281627702731 26.59445443519719 25.97131027560537 29.37141901217013 70-71 18.74634105544869 26.177134732792506 25.930417328761397 29.146106882997408 72-73 18.487078698670235 25.031362381868362 24.429204649995818 32.05235426946558 74-75 18.616709877059463 27.837250146357782 26.908923643054276 26.637116333528475 76 19.33595383457389 27.45671991302166 27.465083214853227 25.742243037551226 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.5 16 3.0 17 5.0 18 3.0 19 1.0 20 3.5 21 6.0 22 7.5 23 10.5 24 15.5 25 19.0 26 26.5 27 47.5 28 71.5 29 82.0 30 110.5 31 155.5 32 195.0 33 218.0 34 255.5 35 329.5 36 410.0 37 454.0 38 490.5 39 575.5 40 679.0 41 751.0 42 768.0 43 767.0 44 777.5 45 739.0 46 689.0 47 724.0 48 741.0 49 652.0 50 581.0 51 553.0 52 480.5 53 391.0 54 346.0 55 314.0 56 251.0 57 206.5 58 193.0 59 167.0 60 143.0 61 117.0 62 89.0 63 99.5 64 97.5 65 83.5 66 82.5 67 83.0 68 75.0 69 68.0 70 56.5 71 44.0 72 37.5 73 37.5 74 40.0 75 36.0 76 32.0 77 25.5 78 20.5 79 18.0 80 14.0 81 8.0 82 4.5 83 3.0 84 2.5 85 2.0 86 2.0 87 2.0 88 1.0 89 0.5 90 0.5 91 0.0 92 0.0 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.012544952747344651 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 11957.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 96.21142427030192 #Duplication Level Percentage of deduplicated Percentage of total 1 96.95757997218358 93.28426862925483 2 2.5034770514603615 4.817261854980346 3 0.35639777468706535 1.0286861252822614 4 0.09561891515994438 0.36798528058877644 5 0.03477051460361613 0.16726603663126202 6 0.03477051460361613 0.20071924395751442 7 0.008692628650904033 0.05854311282094171 8 0.0 0.0 9 0.008692628650904033 0.07526971648406791 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.008363301831563101 0.0 20 0.0 0.0 0.0 0.008363301831563101 0.0 21 0.0 0.0 0.0 0.008363301831563101 0.0 22 0.0 0.0 0.0 0.016726603663126203 0.0 23 0.0 0.0 0.0 0.016726603663126203 0.0 24 0.0 0.0 0.0 0.033453207326252406 0.0 25 0.0 0.0 0.0 0.033453207326252406 0.0 26 0.0 0.0 0.0 0.033453207326252406 0.0 27 0.0 0.0 0.0 0.033453207326252406 0.0 28 0.0 0.0 0.0 0.041816509157815505 0.0 29 0.0 0.0 0.0 0.041816509157815505 0.0 30 0.0 0.0 0.0 0.041816509157815505 0.0 31 0.0 0.0 0.0 0.041816509157815505 0.0 32 0.0 0.0 0.0 0.041816509157815505 0.0 33 0.0 0.0 0.0 0.058543112820941705 0.0 34 0.0 0.0 0.0 0.058543112820941705 0.0 35 0.0 0.0 0.0 0.07526971648406791 0.0 36 0.0 0.0 0.0 0.09199632014719411 0.0 37 0.0 0.0 0.0 0.10035962197875721 0.0 38 0.0 0.0 0.0 0.11708622564188341 0.0 39 0.0 0.0 0.0 0.18399264029438822 0.0 40 0.0 0.0 0.0 0.20071924395751442 0.0 41 0.0 0.0 0.0 0.250899054946893 0.0 42 0.0 0.0 0.0 0.29271556410470856 0.0 43 0.0 0.0 0.0 0.35962197875721336 0.0 44 0.0 0.0 0.0 0.39307518608346576 0.0 45 0.0 0.0 0.0 0.45998160073597055 0.0 46 0.0 0.0 0.0 0.5268880153884754 0.0 47 0.0 0.0 0.0 0.5519779208831647 0.0 48 0.0 0.0 0.0 0.6021577318725433 0.0 49 0.0 0.0 0.0 0.6356109391987956 0.0 50 0.0 0.0 0.0 0.7025173538513005 0.0 51 0.0 0.0 0.0 0.7694237685038053 0.0 52 0.0 0.0 0.0 0.7861503721669315 0.0 53 0.0 0.0 0.0 0.911599899640378 0.0 54 0.0 0.0 0.0 0.9868696161244459 0.0 55 0.0 0.0 0.0 1.0537760307769508 0.0 56 0.0 0.0 0.0 1.07886593627164 0.0 57 0.0 0.0 0.0 1.1374090490925817 0.0 58 0.0 0.0 0.0 1.1792255582503972 0.0 59 0.0 0.0 0.0 1.254495274734465 0.0 60 0.0 0.0 0.0 1.2712218783975913 0.0 61 0.0 0.0 0.0 1.2795851802291545 0.0 62 0.0 0.0 0.0 1.3046750857238438 0.0 63 0.0 0.0 0.0 1.3715815003763485 0.0 64 0.0 0.0 0.0 1.4301246131972902 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGTTAG 20 0.0067857113 52.5 30 GTAGTTA 20 0.0067857113 52.5 29 >>END_MODULE