##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779695_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 14387 Sequences flagged as poor quality 0 Sequence length 76 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.915062208938625 32.0 23.0 34.0 12.0 34.0 2 26.65920622784458 32.0 21.0 34.0 12.0 34.0 3 25.97462987419198 31.0 21.0 34.0 11.0 34.0 4 28.56398137207201 32.0 23.0 34.0 12.0 34.0 5 27.951205949815805 32.0 23.0 34.0 11.0 34.0 6 29.565023979981927 34.0 24.0 37.0 11.0 38.0 7 30.763953569194413 34.0 27.0 37.0 12.0 38.0 8 30.261069020643635 34.0 26.0 37.0 11.0 38.0 9 32.11315771182317 36.0 31.0 38.0 12.0 38.0 10-11 31.608257454646555 36.0 29.0 38.0 11.0 38.0 12-13 30.603982762215885 35.5 26.5 37.5 11.0 38.0 14-15 30.734552026134704 35.0 26.5 37.5 11.5 38.0 16-17 30.501320636685897 35.0 26.5 37.5 11.0 38.0 18-19 30.836901369291724 35.5 26.5 37.5 11.5 38.0 20-21 29.9089455758671 34.5 24.0 37.0 11.0 38.0 22-23 29.934802252033087 35.0 26.0 37.5 11.0 38.0 24-25 31.44064085632863 35.0 29.0 37.5 16.0 38.0 26-27 29.636685896990336 34.0 23.5 37.0 11.0 38.0 28-29 32.012893584485994 36.5 29.5 38.0 11.0 38.0 30-31 32.77093904219086 37.0 31.5 38.0 21.0 38.0 32-33 33.064120386460004 37.0 34.0 38.0 21.0 38.0 34-35 33.118718287342745 37.0 34.0 38.0 21.0 38.0 36-37 30.31076666434976 35.0 25.0 38.0 11.0 38.0 38-39 27.988496559393898 33.0 21.0 37.0 11.0 38.0 40-41 29.378119135330508 34.0 24.5 37.0 11.0 38.0 42-43 30.835511225411828 35.0 27.5 37.0 16.0 38.0 44-45 32.98776673385696 37.0 33.0 38.0 21.0 38.0 46-47 31.235386112462642 35.5 28.5 38.0 16.0 38.0 48-49 30.23924376172934 35.0 24.5 37.0 16.0 38.0 50-51 27.681344269131856 32.5 21.0 37.0 11.0 38.0 52-53 31.565580037533884 35.0 28.5 37.0 16.0 38.0 54-55 30.6384930840342 35.0 27.0 37.5 15.0 38.0 56-57 31.292173489956213 36.0 28.0 38.0 16.0 38.0 58-59 32.64829359838743 36.5 31.5 38.0 21.0 38.0 60-61 33.300027802877594 37.0 34.0 38.0 22.0 38.0 62-63 33.17665253353722 37.0 33.5 38.0 21.5 38.0 64-65 32.80120942517551 37.0 32.5 38.0 16.0 38.0 66-67 30.2794884270522 35.0 24.5 37.5 11.0 38.0 68-69 30.127649961771045 34.5 25.0 37.0 11.0 38.0 70-71 29.54191283797873 34.0 24.0 37.0 11.0 38.0 72-73 28.14193369013693 33.0 21.5 37.0 11.0 38.0 74-75 30.46590672134566 35.0 26.0 37.0 15.0 38.0 76 30.824285813581707 34.0 27.0 37.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 10.0 14 23.0 15 35.0 16 61.0 17 92.0 18 160.0 19 208.0 20 215.0 21 257.0 22 290.0 23 342.0 24 365.0 25 418.0 26 521.0 27 539.0 28 699.0 29 837.0 30 1009.0 31 1145.0 32 1345.0 33 1597.0 34 1589.0 35 1437.0 36 980.0 37 213.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.649336206297356 20.90081323416974 11.517342044901648 32.932508514631266 2 17.418502815041357 17.077917564467924 42.496698408285255 23.006881212205464 3 16.76513519149232 16.848543824285812 40.68951136442622 25.696809619795648 4 12.358379092236046 19.489817196079795 35.031625773267535 33.12017793841663 5 11.385278376311948 30.346840898032944 42.24647250990478 16.02140821575033 6 25.272815736428722 37.658997706262596 17.230833391255995 19.837353166052687 7 26.45443803433655 27.96274414401891 20.622784458191422 24.960033363453118 8 21.741850281504135 34.489469660109826 18.815597414332384 24.95308264405366 9 23.284909988183777 15.673872245777437 20.08757906443317 40.95363870160561 10-11 22.947800097310072 24.970459442552304 28.324181552790712 23.75755890734691 12-13 21.689719886008202 21.005074025161605 31.84819628831584 25.457009800514353 14-15 23.034684089803296 24.14679919371655 23.861819698338778 28.956697018141377 16-17 25.17898102453604 24.258010704107875 25.93313407937722 24.62987419197887 18-19 19.941613957044556 24.78626537846667 29.095711406130537 26.17640925835824 20-21 24.53256412038646 24.71675818447209 26.17640925835824 24.574268436783207 22-23 24.66462778897616 23.20845207478974 27.583929936748454 24.542990199485647 24-25 20.292625286717175 27.215541808577186 25.81497184958643 26.676861055119204 26-27 23.37526934037673 25.140752067839024 27.201640369778275 24.28233822200598 28-29 21.422117189129075 26.795023284909984 26.742892889414055 25.039966636546886 30-31 21.005074025161605 27.139083895183152 26.513519149231946 25.3423229304233 32-33 21.196218808646694 26.7845972058108 26.583026343226525 25.436157642315983 34-35 21.293528880239105 26.78807256551053 26.88190727740321 25.036491276847155 36-37 23.340515743379438 24.011260165427124 29.856815180371164 22.79140891082227 38-39 23.13894488079516 22.53423229304233 34.322652394522834 20.004170431639675 40-41 21.547230138319314 26.27371932995065 25.199833182734416 26.979217348995622 42-43 19.913811079446724 27.587405296448182 26.072148467366375 26.42663515673872 44-45 20.10843122263154 25.93313407937722 28.320706193090984 25.63772850490026 46-47 23.542086605963718 24.324042538402722 27.594356015847637 24.539514839785916 48-49 23.75408354764718 25.279766455828177 27.034823104191286 23.931326892333356 50-51 27.875860151525682 22.204073121568083 27.830680475429208 22.089386251477027 52-53 20.31000208521582 26.54132202682978 27.841106554528395 25.30756933342601 54-55 22.82963786751929 25.130325988739834 27.615208174046014 24.424827969694864 56-57 21.66191700841037 25.335372211023845 28.028775978313757 24.97393480225203 58-59 20.05282546743588 26.593452422325708 27.76464864113436 25.58907346910405 60-61 20.296100646416903 26.680336414818935 27.594356015847637 25.42920692291652 62-63 19.934663237645093 26.43358587613818 27.809828317230835 25.82192256898589 64-65 20.02502258983805 28.01139917981511 27.187738930979354 24.775839299367487 66-67 18.714811983040246 28.233822200597764 24.511711962188087 28.539653854173906 68-69 18.37550396218546 28.367857639371614 25.507437786737107 27.749200611705827 70-71 18.325571696670607 28.185167164801555 24.69938138597345 28.789879752554388 72-73 17.995412525196357 28.873288385347884 23.04163480920275 30.089664280253004 74-75 19.70528949746299 27.938416626120805 25.825397928685618 26.530895947730592 76 20.970320428164317 26.586501702926252 26.398832279140894 26.044345589768543 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.5 4 1.0 5 0.5 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 1.5 12 3.0 13 1.5 14 1.0 15 1.0 16 2.5 17 5.0 18 3.5 19 5.5 20 7.5 21 6.0 22 8.5 23 16.5 24 28.0 25 34.0 26 49.0 27 74.5 28 92.0 29 99.0 30 121.5 31 179.5 32 235.0 33 255.0 34 307.5 35 393.0 36 474.0 37 522.0 38 555.5 39 648.5 40 768.5 41 831.0 42 833.0 43 845.0 44 879.0 45 855.0 46 809.0 47 823.5 48 788.5 49 716.5 50 694.0 51 648.0 52 565.5 53 477.5 54 426.0 55 370.5 56 307.0 57 280.5 58 262.0 59 240.0 60 201.0 61 163.5 62 143.0 63 147.0 64 153.0 65 150.5 66 128.0 67 110.0 68 103.5 69 103.0 70 107.5 71 106.0 72 96.0 73 86.5 74 77.5 75 68.0 76 64.0 77 53.5 78 42.5 79 38.0 80 36.0 81 30.0 82 18.0 83 10.0 84 9.0 85 4.5 86 2.0 87 3.0 88 2.5 89 1.5 90 0.5 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.006950719399457845 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 14387.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 99.25627302425801 #Duplication Level Percentage of deduplicated Percentage of total 1 99.34173669467788 98.60290540070898 2 0.5742296918767508 1.1399179815110865 3 0.07703081232492998 0.22937374018210888 4 0.007002801120448179 0.02780287759783138 5 0.0 0.0 6 0.0 0.0 7 0.0 0.0 8 0.0 0.0 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.006950719399457844 0.0 20 0.0 0.0 0.0 0.013901438798915687 0.0 21 0.0 0.0 0.0 0.013901438798915687 0.0 22 0.0 0.0 0.0 0.03475359699728922 0.0 23 0.0 0.0 0.0 0.041704316396747064 0.0 24 0.0 0.0 0.0 0.041704316396747064 0.0 25 0.0 0.0 0.0 0.041704316396747064 0.0 26 0.0 0.0 0.0 0.041704316396747064 0.0 27 0.0 0.0 0.0 0.041704316396747064 0.0 28 0.0 0.0 0.0 0.041704316396747064 0.0 29 0.0 0.0 0.0 0.041704316396747064 0.0 30 0.0 0.0 0.0 0.041704316396747064 0.0 31 0.0 0.0 0.0 0.041704316396747064 0.0 32 0.0 0.0 0.0 0.041704316396747064 0.0 33 0.0 0.0 0.0 0.041704316396747064 0.0 34 0.0 0.0 0.0 0.04865503579620491 0.0 35 0.0 0.0 0.0 0.04865503579620491 0.0 36 0.0 0.0 0.0 0.05560575519566275 0.0 37 0.0 0.0 0.0 0.06950719399457844 0.0 38 0.0 0.0 0.0 0.09035935219295196 0.0 39 0.0 0.0 0.0 0.1112115103913255 0.0 40 0.0 0.0 0.0 0.13206366858969903 0.0 41 0.0 0.0 0.0 0.16681726558698826 0.0 42 0.0 0.0 0.0 0.20852158198373533 0.0 43 0.0 0.0 0.0 0.29193021477722947 0.0 44 0.0 0.0 0.0 0.35448668937235006 0.0 45 0.0 0.0 0.0 0.43789532216584415 0.0 46 0.0 0.0 0.0 0.4865503579620491 0.0 47 0.0 0.0 0.0 0.5838604295544589 0.0 48 0.0 0.0 0.0 0.667269062347953 0.0 49 0.0 0.0 0.0 0.7367762563425314 0.0 50 0.0 0.0 0.0 0.8549384861333148 0.0 51 0.0 0.0 0.0 1.0356571905192187 0.0 52 0.0 0.0 0.0 1.1746715785083757 0.0 53 0.0 0.0 0.0 1.3901438798915688 0.0 54 0.0 0.0 0.0 1.5222075484812678 0.0 55 0.0 0.0 0.0 1.647320497671509 0.0 56 0.0 0.0 0.0 1.7515812886633766 0.0 57 0.0 0.0 0.0 1.8488913602557864 0.0 58 0.0 0.0 0.0 1.9879057482449434 0.0 59 0.0 0.0 0.0 2.1269201362341 0.0 60 0.0 0.0 0.0 2.217279488427052 0.0 61 0.0 0.0 0.0 2.2937374018210885 0.0 62 0.0 0.0 0.0 2.363244595815667 0.0 63 0.0 0.0 0.0 2.488357545005908 0.0 64 0.0 0.0 0.0 2.6204212135956073 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTGGCA 15 0.002183294 69.97562 48 CTATTCC 15 0.002183294 69.97562 28 >>END_MODULE