##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779693_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 32484 Sequences flagged as poor quality 0 Sequence length 76 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.836842753355498 34.0 32.0 34.0 21.0 34.0 2 28.65444526536141 34.0 23.0 34.0 12.0 34.0 3 27.8198805565817 34.0 23.0 34.0 11.0 34.0 4 30.7211550301687 34.0 32.0 34.0 23.0 34.0 5 29.918113532816157 34.0 31.0 34.0 11.0 34.0 6 32.7918667651767 37.0 33.0 38.0 12.0 38.0 7 33.669067848787094 37.0 34.0 38.0 21.0 38.0 8 32.9896256618643 37.0 34.0 38.0 12.0 38.0 9 34.486855067109964 38.0 35.0 38.0 26.0 38.0 10-11 34.282400566432706 38.0 35.0 38.0 23.5 38.0 12-13 33.02081024504371 37.5 31.5 38.0 18.5 38.0 14-15 33.31156877231868 37.0 33.0 38.0 21.0 38.0 16-17 32.83659647826622 37.5 31.5 38.0 18.5 38.0 18-19 33.40338320403891 37.0 33.5 38.0 22.0 38.0 20-21 32.33839736485655 37.0 30.0 38.0 17.0 38.0 22-23 32.269809752493536 37.0 29.0 38.0 17.0 38.0 24-25 33.91057135820712 37.5 34.0 38.0 23.0 38.0 26-27 32.09626277552026 37.0 30.0 38.0 16.0 38.0 28-29 34.61824282723802 38.0 35.5 38.0 25.5 38.0 30-31 35.05699729097402 38.0 37.0 38.0 26.5 38.0 32-33 35.17784139884251 38.0 37.0 38.0 27.0 38.0 34-35 35.21512129048147 38.0 37.0 38.0 27.0 38.0 36-37 32.835165004309815 37.0 30.5 38.0 17.0 38.0 38-39 30.5894132495998 36.0 25.5 38.0 11.0 38.0 40-41 32.350557197389485 36.5 30.5 38.0 16.0 38.0 42-43 33.54711550301687 37.5 33.0 38.0 18.5 38.0 44-45 35.208733530353406 38.0 37.0 38.0 27.0 38.0 46-47 33.55844415712351 37.5 32.0 38.0 19.0 38.0 48-49 32.80165619997537 37.0 30.5 38.0 18.0 38.0 50-51 30.432643763083362 36.0 24.5 38.0 11.0 38.0 52-53 34.36291712843246 37.5 35.0 38.0 25.0 38.0 54-55 33.30156384681689 37.5 33.0 38.0 18.5 38.0 56-57 33.78587920206871 37.5 34.0 38.0 19.0 38.0 58-59 35.0076499199606 38.0 36.5 38.0 26.5 38.0 60-61 35.42419344908262 38.0 37.0 38.0 29.5 38.0 62-63 35.332856175347864 38.0 37.0 38.0 29.0 38.0 64-65 34.965367565570745 38.0 36.5 38.0 27.0 38.0 66-67 32.89391700529492 37.5 33.0 38.0 14.5 38.0 68-69 32.79891638960719 37.0 32.5 38.0 15.5 38.0 70-71 32.15152074867627 37.0 30.0 38.0 11.0 38.0 72-73 31.081193818495258 36.5 26.0 38.0 11.0 38.0 74-75 33.41060214259328 37.0 33.0 38.0 18.0 38.0 76 34.11267085334318 37.0 34.0 38.0 24.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 5.0 13 35.0 14 82.0 15 166.0 16 240.0 17 325.0 18 357.0 19 384.0 20 331.0 21 319.0 22 229.0 23 232.0 24 229.0 25 277.0 26 334.0 27 385.0 28 521.0 29 665.0 30 863.0 31 1272.0 32 1903.0 33 2895.0 34 4264.0 35 6094.0 36 6862.0 37 3215.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.00541805196404 20.991872922053933 11.959734022903582 31.04297500307844 2 19.83438000246275 17.134589336288634 38.60977712104421 24.421253540204408 3 20.28075360177318 18.356729466814432 33.03472478758774 28.327792143824652 4 14.511759635512869 17.46090382957764 33.02856791035587 34.99876862455363 5 15.315232114271641 30.667405491934492 36.98743997044699 17.02992242334688 6 29.522226326807044 31.594015515330625 16.41423470016008 22.469523457702252 7 27.80137914049994 26.308336411771947 21.545991872922055 24.344292574806058 8 23.611624184213767 31.926486885851496 17.913434306119935 26.5484546238148 9 23.346878463243442 15.019702007141976 19.76357591429627 41.86984361531831 10-11 25.648011328654107 23.277613594384928 25.57566802117966 25.498707055781306 12-13 25.040019702007143 19.85900751139022 27.545868735377415 27.55510405122522 14-15 22.82046545991873 22.371013421992366 23.03595616303411 31.772564955054794 16-17 24.2211550301687 23.97026228297008 25.994335672946683 25.814247013914542 18-19 23.18526043590691 23.28223125230883 26.546915404506834 26.98559290727743 20-21 23.965644625046174 23.27607437507696 26.782415958625784 25.97586504125108 22-23 24.14265484546238 22.278660263514347 27.431966506587855 26.146718384435413 24-25 23.3114764191602 24.616734392316218 24.258096293559905 27.813692894963676 26-27 22.252493535278905 24.008742765669254 27.44735869966753 26.29140499938431 28-29 23.49156507819234 24.88609777121044 25.520256126092843 26.10208102450437 30-31 22.97900504863933 24.915342938061816 25.297069326437633 26.808582686861225 32-33 23.299162664696464 24.62904814677995 25.344785124984607 26.727004063538974 34-35 23.434613963797563 24.667528629479126 25.49101095924147 26.406846447481836 36-37 23.62547715798547 22.815847801994828 28.484792513237284 25.073882526782416 38-39 22.972848171407463 22.20016007880803 31.460103435537494 23.366888314247014 40-41 23.576222140130525 23.017485531338505 24.642901120551656 28.76339120797931 42-43 22.544945203792636 23.894840536879695 24.81529368304396 28.74492057628371 44-45 22.504925501785493 24.02413495874892 26.2267577884497 27.244181751015883 46-47 23.340721586011576 23.09136805812092 27.550486393301316 26.017423962566188 48-49 23.31301563846817 23.268378278537124 27.558182489841155 25.860423593153552 50-51 23.44077084102943 21.79842383942864 30.593522965152076 24.167282354389855 52-53 22.324836842753356 24.131880310306613 26.73316094077084 26.810121906169194 54-55 22.62960226573082 23.52850634158355 27.435044945203792 26.406846447481836 56-57 22.603435537495383 23.913311168575298 26.617719492673313 26.865533801256003 58-59 21.60140376800887 24.738332717645612 26.48842507080409 27.171838443541436 60-61 22.355621228912696 23.739379386775028 26.474572097032382 27.43042728727989 62-63 21.33204038911464 24.453577145671716 26.2406107622214 27.973771702992245 64-65 22.066247999014898 24.8322250954316 25.7788449698313 27.322681935722205 66-67 21.062677010220415 23.59315355251816 23.974879940893977 31.369289496367443 68-69 20.781059987993164 23.942859781721904 24.70637131905854 30.56970891122639 70-71 21.221216598941016 23.839428641792882 23.797869720477774 31.141485038788325 72-73 21.284324590567664 22.837396872306368 22.634219923654722 33.24405861347125 74-75 22.351003570988794 24.76296022657308 24.52130279522226 28.36473340721586 76 23.152936830439604 23.85482083487255 25.107745351557693 27.88449698313016 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 1.0 14 1.0 15 0.5 16 3.0 17 5.0 18 5.5 19 5.5 20 8.5 21 12.0 22 12.5 23 16.5 24 39.5 25 59.0 26 60.5 27 94.5 28 138.0 29 149.0 30 185.0 31 278.0 32 354.5 33 374.0 34 473.5 35 662.0 36 866.0 37 981.0 38 1027.5 39 1204.0 40 1434.5 41 1550.0 42 1565.0 43 1680.5 44 1820.5 45 1853.0 46 1861.0 47 1796.0 48 1663.0 49 1516.5 50 1438.0 51 1355.0 52 1169.0 53 1006.5 54 947.0 55 864.0 56 724.5 57 604.5 58 541.0 59 532.0 60 514.5 61 513.5 62 521.0 63 514.0 64 533.5 65 580.0 66 606.5 67 613.0 68 614.0 69 619.5 70 576.0 71 528.0 72 506.5 73 463.0 74 387.5 75 334.0 76 300.5 77 238.0 78 177.0 79 145.0 80 121.5 81 81.5 82 53.5 83 42.0 84 33.0 85 19.0 86 10.5 87 7.0 88 5.5 89 4.0 90 2.5 91 1.0 92 1.0 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.007696096539834996 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 32484.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 97.36793498337644 #Duplication Level Percentage of deduplicated Percentage of total 1 97.89117581965917 95.31461642654845 2 1.6820006955641973 3.2754586873537743 3 0.3319738214929337 0.9697081640192096 4 0.05690979797021721 0.2216475803472479 5 0.025293243542318756 0.12313754463735993 6 0.006323310885579689 0.03694126339120798 7 0.0031616554427898445 0.021549070311537986 8 0.0 0.0 9 0.0 0.0 >10 0.0031616554427898445 0.03694126339120798 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0030784386159339984 0.0 20 0.0 0.0 0.0 0.0030784386159339984 0.0 21 0.0 0.0 0.0 0.006156877231867997 0.0 22 0.0 0.0 0.0 0.030784386159339983 0.0 23 0.0 0.0 0.0 0.030784386159339983 0.0 24 0.0 0.0 0.0 0.04309814062307597 0.0 25 0.0 0.0 0.0 0.04309814062307597 0.0 26 0.0 0.0 0.0 0.04309814062307597 0.0 27 0.0 0.0 0.0 0.049255017854943975 0.0 28 0.0 0.0 0.0 0.058490333702745964 0.0 29 0.0 0.0 0.0 0.06464721093461397 0.0 30 0.0 0.0 0.0 0.06464721093461397 0.0 31 0.0 0.0 0.0 0.06464721093461397 0.0 32 0.0 0.0 0.0 0.06772564955054797 0.0 33 0.0 0.0 0.0 0.07388252678241596 0.0 34 0.0 0.0 0.0 0.09543159709395395 0.0 35 0.0 0.0 0.0 0.11698066740549193 0.0 36 0.0 0.0 0.0 0.1416081763329639 0.0 37 0.0 0.0 0.0 0.23088289619504987 0.0 38 0.0 0.0 0.0 0.30168698436153185 0.0 39 0.0 0.0 0.0 0.42174609038295774 0.0 40 0.0 0.0 0.0 0.6156877231867997 0.0 41 0.0 0.0 0.0 0.8619628124615195 0.0 42 0.0 0.0 0.0 1.1236300948159095 0.0 43 0.0 0.0 0.0 1.3729836227065633 0.0 44 0.0 0.0 0.0 1.5977096416697452 0.0 45 0.0 0.0 0.0 1.807043467553257 0.0 46 0.0 0.0 0.0 2.034847925132373 0.0 47 0.0 0.0 0.0 2.3396133481098387 0.0 48 0.0 0.0 0.0 2.5612609284570866 0.0 49 0.0 0.0 0.0 2.81061445634774 0.0 50 0.0 0.0 0.0 3.136928949636744 0.0 51 0.0 0.0 0.0 3.484792513237286 0.0 52 0.0 0.0 0.0 3.844969831301564 0.0 53 0.0 0.0 0.0 4.476049747568034 0.0 54 0.0 0.0 0.0 4.9501292944218696 0.0 55 0.0 0.0 0.0 5.282600664942741 0.0 56 0.0 0.0 0.0 5.584287649304273 0.0 57 0.0 0.0 0.0 5.781307720724048 0.0 58 0.0 0.0 0.0 6.009112178303164 0.0 59 0.0 0.0 0.0 6.286171653737225 0.0 60 0.0 0.0 0.0 6.486270163772934 0.0 61 0.0 0.0 0.0 6.7079177441201825 0.0 62 0.0 0.0 0.0 6.895702499692156 0.0 63 0.0 0.0 0.0 7.0988794483438 0.0 64 0.0 0.0 0.0 7.34515453761852 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATCA 15 0.002205419 70.0 56 CGGCATT 15 0.002205419 70.0 65 ATTACGG 15 0.002205419 70.0 28 TACCTGA 15 0.002205419 70.0 58 TAGATCT 15 0.002205419 70.0 39 CATCGGC 15 0.002205419 70.0 62 ACCCCAA 15 0.002205419 70.0 40 GTCGCCG 20 0.006891618 52.499996 51 TTATGAT 20 0.006891618 52.499996 17 GGTCCTT 20 0.006891618 52.499996 42 TACGGAT 20 0.006891618 52.499996 30 AACATCG 20 0.006891618 52.499996 60 TATTACG 20 0.006891618 52.499996 27 CTTCTAG 20 0.006891618 52.499996 1 GGCATTA 20 0.006891618 52.499996 66 ATCGGCA 20 0.006891618 52.499996 63 GCTCGGA 20 0.006891618 52.499996 11 AAAATCC 20 0.006891618 52.499996 8 CTTTGAC 30 5.794888E-4 46.666664 9 CCCCTCT 50 1.6742019E-4 35.000004 7 >>END_MODULE