##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779688_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 33808 Sequences flagged as poor quality 0 Sequence length 76 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.81717345007099 34.0 32.0 34.0 21.0 34.0 2 28.911411500236632 34.0 24.0 34.0 12.0 34.0 3 28.001094415522953 34.0 23.0 34.0 11.0 34.0 4 30.74435044959773 34.0 32.0 34.0 23.0 34.0 5 30.140440132513014 34.0 31.0 34.0 11.0 34.0 6 32.82081164221486 37.0 33.0 38.0 12.0 38.0 7 33.86742782773308 37.0 34.0 38.0 21.0 38.0 8 33.156530998580216 37.0 34.0 38.0 12.0 38.0 9 34.560636535731184 38.0 36.0 38.0 26.0 38.0 10-11 34.39762778040701 38.0 36.0 38.0 23.5 38.0 12-13 33.15673805016564 37.5 32.0 38.0 18.5 38.0 14-15 33.42309512541411 37.0 34.0 38.0 21.0 38.0 16-17 33.02095657832466 37.5 31.5 38.0 18.5 38.0 18-19 33.57141800757218 37.0 34.0 38.0 22.0 38.0 20-21 32.57397657359205 37.0 30.5 38.0 17.0 38.0 22-23 32.5350212967345 37.5 30.5 38.0 17.5 38.0 24-25 34.047917652626595 37.5 35.0 38.0 23.5 38.0 26-27 32.30433625177473 37.0 30.5 38.0 16.0 38.0 28-29 34.65480063890203 38.0 36.0 38.0 25.5 38.0 30-31 35.03840806909607 38.0 37.0 38.0 26.5 38.0 32-33 35.13808861807856 38.0 37.0 38.0 27.0 38.0 34-35 35.19354886417416 38.0 37.0 38.0 27.0 38.0 36-37 32.94270586843351 37.5 30.5 38.0 17.0 38.0 38-39 30.930889138665403 36.5 26.0 38.0 11.0 38.0 40-41 32.45611985328916 37.0 30.5 38.0 16.0 38.0 42-43 33.55080158542357 37.5 33.5 38.0 18.5 38.0 44-45 35.14240712257454 38.0 37.0 38.0 27.0 38.0 46-47 33.60209122101278 37.5 32.0 38.0 19.0 38.0 48-49 32.9778011121628 37.0 30.5 38.0 17.5 38.0 50-51 30.715451964032184 36.5 25.0 38.0 11.0 38.0 52-53 34.36807856128727 37.5 35.0 38.0 24.5 38.0 54-55 33.41252070515854 37.5 33.5 38.0 18.0 38.0 56-57 33.78329093705632 38.0 34.0 38.0 18.5 38.0 58-59 34.95870799810696 38.0 36.5 38.0 26.5 38.0 60-61 35.30985269758637 38.0 37.0 38.0 27.0 38.0 62-63 35.24963026502603 38.0 37.0 38.0 27.0 38.0 64-65 34.89675520586843 38.0 36.5 38.0 25.0 38.0 66-67 32.97675106483672 37.5 33.0 38.0 11.0 38.0 68-69 32.92256270705158 37.0 32.5 38.0 16.0 38.0 70-71 32.368906767628964 37.0 30.5 38.0 11.0 38.0 72-73 31.323355418835778 36.5 26.0 38.0 11.0 38.0 74-75 33.53894048745859 37.5 33.5 38.0 18.0 38.0 76 34.23689659252248 37.0 35.0 38.0 24.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 9.0 13 46.0 14 119.0 15 183.0 16 266.0 17 404.0 18 452.0 19 462.0 20 399.0 21 334.0 22 251.0 23 219.0 24 225.0 25 255.0 26 283.0 27 343.0 28 449.0 29 560.0 30 736.0 31 1168.0 32 1651.0 33 2596.0 34 4033.0 35 6294.0 36 7767.0 37 4303.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 41.02579271178419 18.72633696166588 11.60080454330336 28.647065783246568 2 22.006625650733554 18.321107430194036 36.34051112162802 23.33175579744439 3 21.24053478466635 18.196876478939895 34.089564600094654 26.4730241362991 4 14.611926171320397 18.208707998106956 32.96852815901562 34.21083767155702 5 14.668125887363937 29.59358731661145 36.94096071935636 18.797326076668245 6 28.289162328442973 31.504377662091816 17.803478466635116 22.4029815428301 7 27.298272598201613 28.167889256980594 20.663748225272123 23.87008991954567 8 23.169072408897303 31.711429247515383 18.903809749171792 26.21568859441552 9 23.722195929957408 17.759110269758636 20.678537624230948 37.840156176053 10-11 24.8210482725982 23.99875769048746 26.64014434453384 24.540049692380503 12-13 24.79738523426408 20.993551822053952 27.949006152389966 26.260056791292 14-15 23.101041173686703 22.85257927117842 24.14960955986749 29.89676999526739 16-17 23.544723142451492 24.597728348319926 26.489292475153807 25.368256034074776 18-19 22.334950307619497 24.664280643634644 27.274609559867486 25.72615948887837 20-21 23.39239233317558 24.58885470894463 27.51715570279224 24.501597255087553 22-23 23.135056791292 23.782832465688593 27.75970184571699 25.322408897302413 24-25 22.712079981069568 25.458471367723618 25.07098911500237 26.758459536204448 26-27 21.965215333648842 24.125946521533365 28.623402744912447 25.28543539990535 28-29 22.985683861807857 25.563476100331282 26.047089446284904 25.403750591575957 30-31 23.041883577851397 25.439245149077138 26.24822527212494 25.270646000946524 32-33 22.66327496450544 25.418539990534782 26.338440605773783 25.57974443918599 34-35 22.505028395646 24.96154756270705 26.520350212967347 26.0130738286796 36-37 22.715037860861333 23.739943208708 29.821344060577378 23.72367486985329 38-39 23.114351632749646 22.945752484619025 31.80608140085187 22.13381448177946 40-41 23.012304779933743 23.70296971131093 25.516150023663037 27.768575485092285 42-43 21.861689540937057 24.71456460009465 25.93025319451018 27.49349266445812 44-45 21.911973497397067 25.102046852815903 27.286441079034546 25.699538570752484 46-47 22.435518220539517 24.476455276857546 28.558329389493608 24.52969711310932 48-49 22.630738286796024 24.30933506862281 28.474029815428302 24.585896829152865 50-51 22.655880265026028 22.985683861807857 31.5058566019877 22.85257927117842 52-53 21.79217936583057 25.306140558447705 27.12375769048746 25.777922385234262 54-55 22.428123521060105 24.486807856128724 28.1590156176053 24.926053005205866 56-57 22.505028395646 24.59920728821581 27.64138665404638 25.254377662091816 58-59 21.3810340747752 24.924574065309983 27.65913393279697 26.035257927117843 60-61 21.66646947468055 25.183388547089447 27.197704685281593 25.952437292948417 62-63 21.586606720302886 25.30318267865594 26.758459536204448 26.351751064836726 64-65 21.36328679602461 25.369734973970658 26.924100804543304 26.34287742546143 66-67 20.591280170373878 24.219119734973972 24.94971604353999 30.239884051112163 68-69 20.608507868891255 24.79440302922731 25.10945450242575 29.487634599455685 70-71 20.842699952673925 23.96474207288216 24.355182205395174 30.837375769048748 72-73 20.820515854235683 23.275556081400854 23.621628017037388 32.28230004732608 74-75 21.885352579271178 25.496923805016564 25.44811878845244 27.169604827259818 76 22.453265499290108 25.43480832938949 25.008873639375295 27.103052531945103 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.5 11 1.0 12 1.0 13 1.5 14 2.5 15 3.5 16 8.5 17 13.0 18 16.5 19 21.5 20 29.5 21 36.0 22 41.5 23 70.0 24 132.0 25 171.0 26 186.5 27 232.0 28 290.0 29 318.0 30 375.0 31 488.0 32 600.5 33 657.0 34 715.5 35 841.0 36 944.5 37 981.0 38 1073.0 39 1240.0 40 1417.0 41 1558.5 42 1598.0 43 1631.0 44 1662.5 45 1679.0 46 1697.0 47 1660.5 48 1611.5 49 1532.0 50 1465.0 51 1377.5 52 1235.0 53 1105.5 54 1031.0 55 986.0 56 885.0 57 783.0 58 737.0 59 699.0 60 641.0 61 584.5 62 548.0 63 559.5 64 553.5 65 529.0 66 513.5 67 505.0 68 491.5 69 462.5 70 435.5 71 424.0 72 415.0 73 380.5 74 303.5 75 252.0 76 226.0 77 185.0 78 142.5 79 115.0 80 91.0 81 59.5 82 41.0 83 30.0 84 25.0 85 15.5 86 6.5 87 2.0 88 1.5 89 1.5 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.011831519167061051 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 33808.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 98.07146237576904 #Duplication Level Percentage of deduplicated Percentage of total 1 98.25974182651707 96.36476573592049 2 1.5442152249969838 3.028868906767629 3 0.16588249487272289 0.48805016564126835 4 0.030160453613222345 0.1183151916706105 5 0.0 0.0 6 0.0 0.0 7 0.0 0.0 8 0.0 0.0 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.002957879791765263 0.0 20 0.0 0.0 0.0 0.002957879791765263 0.0 21 0.0 0.0 0.0 0.002957879791765263 0.0 22 0.0 0.0 0.0 0.023663038334122102 0.0 23 0.0 0.0 0.0 0.026620918125887363 0.0 24 0.0 0.0 0.0 0.029578797917652628 0.0 25 0.0 0.0 0.0 0.029578797917652628 0.0 26 0.0 0.0 0.0 0.029578797917652628 0.0 27 0.0 0.0 0.0 0.035494557501183154 0.0 28 0.0 0.0 0.0 0.041410317084713676 0.0 29 0.0 0.0 0.0 0.04436819687647894 0.0 30 0.0 0.0 0.0 0.047326076668244205 0.0 31 0.0 0.0 0.0 0.050283956460009466 0.0 32 0.0 0.0 0.0 0.06211547562707052 0.0 33 0.0 0.0 0.0 0.07986275437766209 0.0 34 0.0 0.0 0.0 0.09465215333648841 0.0 35 0.0 0.0 0.0 0.12423095125414103 0.0 36 0.0 0.0 0.0 0.14789398958826314 0.0 37 0.0 0.0 0.0 0.23958826313298628 0.0 38 0.0 0.0 0.0 0.3164931377188831 0.0 39 0.0 0.0 0.0 0.4288925698059631 0.0 40 0.0 0.0 0.0 0.5649550402271651 0.0 41 0.0 0.0 0.0 0.7394699479413157 0.0 42 0.0 0.0 0.0 0.8755324183625177 0.0 43 0.0 0.0 0.0 1.0530052058684336 0.0 44 0.0 0.0 0.0 1.3073828679602462 0.0 45 0.0 0.0 0.0 1.4434453383814483 0.0 46 0.0 0.0 0.0 1.609086606720303 0.0 47 0.0 0.0 0.0 1.8338854708944627 0.0 48 0.0 0.0 0.0 1.9965688594415523 0.0 49 0.0 0.0 0.0 2.150378608613346 0.0 50 0.0 0.0 0.0 2.387008991954567 0.0 51 0.0 0.0 0.0 2.6650496923805016 0.0 52 0.0 0.0 0.0 2.9342167534311407 0.0 53 0.0 0.0 0.0 3.232962612399432 0.0 54 0.0 0.0 0.0 3.5287505915759585 0.0 55 0.0 0.0 0.0 3.703265499290109 0.0 56 0.0 0.0 0.0 3.951727401798391 0.0 57 0.0 0.0 0.0 4.155821107430194 0.0 58 0.0 0.0 0.0 4.318504495977283 0.0 59 0.0 0.0 0.0 4.493019403691434 0.0 60 0.0 0.0 0.0 4.611334595362044 0.0 61 0.0 0.0 0.0 4.7385234264079505 0.0 62 0.0 0.0 0.0 4.85092285849503 0.0 63 0.0 0.0 0.0 5.01360624704212 0.0 64 0.0 0.0 0.0 5.1822053951727405 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTGTAT 15 0.0022062175 70.0 1 TAAAAGG 15 0.0022062175 70.0 14 GTGGTCG 25 2.3578743E-4 55.999996 48 AGAGTAA 20 0.006894094 52.5 50 GGTGGTC 40 4.500393E-5 43.75 47 TGGTGGT 40 0.0023864757 35.0 46 >>END_MODULE