SRR1779685_2.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	SRR1779685_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25127
Sequences flagged as poor quality	0
Sequence length	76
%GC	50

Per base sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTCTTG	15	0.0021995674	70.0	30
AAGCCAT	15	0.0021995674	70.0	25
CCCCGGT	15	0.0021995674	70.0	43
CTCTGCC	45	2.5638656E-8	54.444443	16
CTTGTAC	20	0.0068734707	52.5	37
GAGCTGT	20	0.0068734707	52.5	56
GTGGCCG	20	0.0068734707	52.5	28
ACCCCGG	20	0.0068734707	52.5	42
TGACTCT	20	0.0068734707	52.5	13
ACTCTGC	35	2.02914E-5	50.0	15
TCTGCCG	45	1.6203721E-6	46.666664	17
CTGCCGC	40	4.4670247E-5	43.75	18
TGCCGCC	45	0.004229422	31.111109	19
CTCATTC	50	0.0070788884	28.000002	8
TCTGACG	155	0.007113706	13.548387	59