##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779685_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 25127 Sequences flagged as poor quality 0 Sequence length 76 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.936761252835595 34.0 31.0 34.0 12.0 34.0 2 28.138416842440403 34.0 23.0 34.0 12.0 34.0 3 27.379790663429777 33.0 23.0 34.0 11.0 34.0 4 29.772754407609344 34.0 31.0 34.0 12.0 34.0 5 29.207267083217257 34.0 27.0 34.0 11.0 34.0 6 31.643292076252635 37.0 27.0 38.0 11.0 38.0 7 32.791021610220085 37.0 31.0 38.0 12.0 38.0 8 31.955506029370795 37.0 28.0 38.0 11.0 38.0 9 33.41401679468301 38.0 34.0 38.0 21.0 38.0 10-11 33.16908106817368 38.0 34.0 38.0 11.5 38.0 12-13 32.21144585505631 37.5 30.0 38.0 16.0 38.0 14-15 32.26980936840849 37.0 30.0 38.0 11.5 38.0 16-17 31.864269510884707 37.5 29.0 38.0 16.0 38.0 18-19 32.42396625144267 37.0 30.0 38.0 11.5 38.0 20-21 31.448879691168862 36.5 28.0 38.0 16.0 38.0 22-23 31.342340908186415 36.5 28.5 38.0 11.0 38.0 24-25 32.74841803637521 37.0 32.5 38.0 16.0 38.0 26-27 31.116348947347475 36.5 27.0 38.0 11.0 38.0 28-29 33.26929199665698 37.5 34.0 38.0 11.0 38.0 30-31 33.73311577187886 38.0 35.0 38.0 21.0 38.0 32-33 33.8116368846261 38.0 35.0 38.0 21.0 38.0 34-35 33.863752139133204 38.0 35.5 38.0 21.0 38.0 36-37 31.769510884705696 37.0 29.0 38.0 11.0 38.0 38-39 30.06305965694273 35.0 24.0 38.0 11.0 38.0 40-41 31.336749313487484 36.5 26.5 38.0 11.0 38.0 42-43 32.34379352887332 37.0 30.5 38.0 16.0 38.0 44-45 33.82878974807976 38.0 35.0 38.0 21.0 38.0 46-47 32.40522147490747 37.5 30.5 38.0 16.0 38.0 48-49 31.730509014207826 36.5 29.0 38.0 16.0 38.0 50-51 29.6848609065945 35.0 23.0 38.0 11.0 38.0 52-53 32.98278743980579 37.0 33.0 38.0 16.0 38.0 54-55 32.066203685278786 37.0 29.5 38.0 11.0 38.0 56-57 32.520117801568034 37.5 31.0 38.0 16.0 38.0 58-59 33.56071158514745 38.0 34.5 38.0 21.0 38.0 60-61 33.980598559318665 38.0 36.0 38.0 21.0 38.0 62-63 33.90567914991841 38.0 35.5 38.0 21.0 38.0 64-65 33.591196720659056 38.0 35.0 38.0 16.0 38.0 66-67 31.762705456282085 37.0 27.0 38.0 11.0 38.0 68-69 31.71677876387949 37.0 28.0 38.0 11.0 38.0 70-71 31.12404982687945 36.5 26.0 38.0 11.0 38.0 72-73 30.211107573526483 35.5 24.5 38.0 11.0 38.0 74-75 32.19116886218012 37.0 30.5 38.0 14.5 38.0 76 32.78552951008875 37.0 33.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 8.0 13 54.0 14 167.0 15 245.0 16 378.0 17 535.0 18 632.0 19 601.0 20 499.0 21 382.0 22 279.0 23 230.0 24 207.0 25 209.0 26 254.0 27 284.0 28 309.0 29 402.0 30 568.0 31 805.0 32 1214.0 33 1891.0 34 2804.0 35 4262.0 36 5178.0 37 2730.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.54893142834401 17.913001950093523 10.749393083137662 29.788673538424803 2 22.075854658335654 16.301189955028455 36.932383491861344 24.690571894774546 3 20.181478091296214 16.94193497035062 35.43598519520834 27.44060174314483 4 14.737135352409759 18.67314044653162 31.2412942253353 35.34842997572333 5 14.406813387989015 27.79082262108489 38.492458311776176 19.30990567914992 6 27.416723046921636 31.213435746408248 17.320014327217734 24.049826879452382 7 27.416723046921636 26.358100847693716 19.341743940780834 26.88343216460381 8 23.01906315915151 30.803518127910216 18.139849564213794 28.03756914872448 9 23.568273172284794 17.041429537947227 18.59354479245433 40.79675249731365 10-11 24.704501134238072 22.475822820074022 25.52035658853027 27.29931945715764 12-13 24.654753850439768 19.168623393162733 28.706172642973694 27.470450113423805 14-15 23.33545588410873 21.655987583077966 23.41107175548215 31.597484777331157 16-17 25.243761690611695 22.640983802284396 25.1820750587018 26.933179448402118 18-19 22.766346957456125 22.416126079516058 27.068492060333504 27.749034902694312 20-21 24.067735901619773 22.559398256855175 26.41381780554782 26.959048035977233 22-23 25.27361006089068 21.57838182035261 26.44167628447487 26.706331834281848 24-25 22.732518804473276 24.473673737413936 23.456839256576593 29.336968201536195 26-27 22.847932502885342 23.31953675329327 27.068492060333504 26.764038683487883 28-29 23.33545588410873 24.292593624388108 25.6397500696462 26.732200421856966 30-31 22.82007402395829 24.17717992597604 25.667608548573245 27.33513750149242 32-33 22.997174354280254 24.033907748636924 25.289529191706134 27.679388705376684 34-35 23.160345445138695 23.880686114538147 25.5840331117921 27.374935328531063 36-37 24.103553945954552 22.028097265889283 29.07430254308115 24.79404624507502 38-39 23.733434154495164 20.8421220201377 32.37752218728858 23.04692163807856 40-41 23.498626974967166 22.696700760138498 24.881601464560035 28.9230708003343 42-43 21.610220081983524 23.99410992159828 25.243761690611695 29.1519083058065 44-45 21.39730170732678 23.142436422971304 27.926135233016275 27.534126636685635 46-47 23.80905002586859 22.350459664902296 28.01170056114936 25.828789748079757 48-49 23.681696979344927 22.975285549409 27.812711425956145 25.530306045289926 50-51 25.15023679707088 20.871970390416685 29.985672782266086 23.992120030246348 52-53 21.33362518406495 23.57424284634059 27.55402555020496 27.538106419389504 54-55 23.28371870895849 22.19922792215545 27.364985871771403 27.152067497114658 56-57 23.078759899709475 23.003144028336052 26.89736140406734 27.02073466788713 58-59 21.456998447884747 23.958291877263502 27.09038086520476 27.494328809646994 60-61 21.8251283479922 23.202133163529272 26.316313129303143 28.65642535917539 62-63 20.977434632069087 23.91252437616906 26.75607911808015 28.353961873681698 64-65 21.57042225494488 25.136307557607356 25.70342659290803 27.589843594539737 66-67 20.52174951247662 24.774147331555696 23.12651729215585 31.577585863811837 68-69 20.567164179104477 24.955223880597018 23.592039800995025 30.88557213930348 70-71 20.736657778485295 25.349225932264098 23.21805229434473 30.696063994905877 72-73 20.24117483185418 24.51347156445258 22.179329008636127 33.06602459505711 74-75 21.480877144107932 25.239781907907826 24.286623950332313 28.99271699765193 76 23.317546861941338 23.767262307478013 24.45974449795041 28.455446332630242 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.5 16 0.5 17 0.0 18 1.0 19 3.0 20 5.5 21 7.0 22 6.5 23 12.0 24 24.5 25 31.0 26 42.5 27 70.5 28 109.5 29 132.0 30 152.0 31 196.0 32 257.5 33 295.0 34 355.0 35 469.5 36 579.0 37 634.0 38 700.5 39 837.0 40 982.5 41 1157.0 42 1256.0 43 1284.0 44 1294.5 45 1327.0 46 1377.0 47 1359.5 48 1304.0 49 1250.5 50 1235.0 51 1134.5 52 967.0 53 848.0 54 796.0 55 754.5 56 670.0 57 595.0 58 563.0 59 520.5 60 480.5 61 463.0 62 443.0 63 444.0 64 449.0 65 459.0 66 462.5 67 460.0 68 441.0 69 432.0 70 432.0 71 422.0 72 390.5 73 331.5 74 281.5 75 259.0 76 228.5 77 181.5 78 132.5 79 100.0 80 88.0 81 68.0 82 46.0 83 32.0 84 22.5 85 11.5 86 6.0 87 2.0 88 2.0 89 1.0 90 0.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.007959565407728738 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 25127.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 97.95439169021371 #Duplication Level Percentage of deduplicated Percentage of total 1 98.2326412871247 96.22318621403272 2 1.5276479908991183 2.9927965933060054 3 0.1787673180839394 0.5253313169100967 4 0.04469182952098485 0.17511043897003226 5 0.012188680778450412 0.05969674055796554 6 0.004062893592816804 0.023878696223186214 7 0.0 0.0 8 0.0 0.0 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.003979782703864369 0.0 11 0.0 0.0 0.0 0.003979782703864369 0.0 12 0.0 0.0 0.0 0.003979782703864369 0.0 13 0.0 0.0 0.0 0.003979782703864369 0.0 14 0.0 0.0 0.0 0.007959565407728738 0.0 15 0.0 0.0 0.0 0.007959565407728738 0.0 16 0.0 0.0 0.0 0.007959565407728738 0.0 17 0.0 0.0 0.0 0.007959565407728738 0.0 18 0.0 0.0 0.0 0.007959565407728738 0.0 19 0.0 0.0 0.0 0.007959565407728738 0.0 20 0.0 0.0 0.0 0.015919130815457476 0.0 21 0.0 0.0 0.0 0.015919130815457476 0.0 22 0.0 0.0 0.0 0.0517371751502368 0.0 23 0.0 0.0 0.0 0.06765630596569427 0.0 24 0.0 0.0 0.0 0.07561587137342302 0.0 25 0.0 0.0 0.0 0.08357543678115174 0.0 26 0.0 0.0 0.0 0.08755521948501611 0.0 27 0.0 0.0 0.0 0.11143391570820234 0.0 28 0.0 0.0 0.0 0.1154136984120667 0.0 29 0.0 0.0 0.0 0.11939348111593107 0.0 30 0.0 0.0 0.0 0.1273530465236598 0.0 31 0.0 0.0 0.0 0.13133282922752418 0.0 32 0.0 0.0 0.0 0.15123174274684603 0.0 33 0.0 0.0 0.0 0.17113065626616786 0.0 34 0.0 0.0 0.0 0.19500935248935408 0.0 35 0.0 0.0 0.0 0.23878696223186213 0.0 36 0.0 0.0 0.0 0.30246348549369206 0.0 37 0.0 0.0 0.0 0.3860389222748438 0.0 38 0.0 0.0 0.0 0.5173717515023679 0.0 39 0.0 0.0 0.0 0.6885024077685359 0.0 40 0.0 0.0 0.0 0.8636128467385681 0.0 41 0.0 0.0 0.0 1.0626019819317865 0.0 42 0.0 0.0 0.0 1.2377124209018187 0.0 43 0.0 0.0 0.0 1.5083376447645958 0.0 44 0.0 0.0 0.0 1.7272256934771362 0.0 45 0.0 0.0 0.0 1.8903967843355753 0.0 46 0.0 0.0 0.0 2.0694870060094717 0.0 47 0.0 0.0 0.0 2.3799100569108926 0.0 48 0.0 0.0 0.0 2.662474628885263 0.0 49 0.0 0.0 0.0 2.8216659370398376 0.0 50 0.0 0.0 0.0 3.12412942253353 0.0 51 0.0 0.0 0.0 3.438532256138815 0.0 52 0.0 0.0 0.0 3.6415011740358976 0.0 53 0.0 0.0 0.0 3.987742269272098 0.0 54 0.0 0.0 0.0 4.2623472758387395 0.0 55 0.0 0.0 0.0 4.473275759143551 0.0 56 0.0 0.0 0.0 4.7279818521908705 0.0 57 0.0 0.0 0.0 4.958809249015004 0.0 58 0.0 0.0 0.0 5.145859036096629 0.0 59 0.0 0.0 0.0 5.384645998328491 0.0 60 0.0 0.0 0.0 5.54781708918693 0.0 61 0.0 0.0 0.0 5.786604051418792 0.0 62 0.0 0.0 0.0 5.933856011461774 0.0 63 0.0 0.0 0.0 6.1209057985434 0.0 64 0.0 0.0 0.0 6.256218410474788 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTCTTG 15 0.0021995674 70.0 30 AAGCCAT 15 0.0021995674 70.0 25 CCCCGGT 15 0.0021995674 70.0 43 CTCTGCC 45 2.5638656E-8 54.444443 16 CTTGTAC 20 0.0068734707 52.5 37 GAGCTGT 20 0.0068734707 52.5 56 GTGGCCG 20 0.0068734707 52.5 28 ACCCCGG 20 0.0068734707 52.5 42 TGACTCT 20 0.0068734707 52.5 13 ACTCTGC 35 2.02914E-5 50.0 15 TCTGCCG 45 1.6203721E-6 46.666664 17 CTGCCGC 40 4.4670247E-5 43.75 18 TGCCGCC 45 0.004229422 31.111109 19 CTCATTC 50 0.0070788884 28.000002 8 TCTGACG 155 0.007113706 13.548387 59 >>END_MODULE