##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1779684_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8642 Sequences flagged as poor quality 0 Sequence length 76 %GC 53 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 23.58643832446193 23.0 12.0 34.0 12.0 34.0 2 24.21164082388336 23.0 12.0 34.0 12.0 34.0 3 24.076486924323074 23.0 11.0 34.0 11.0 34.0 4 24.125896783152047 23.0 12.0 34.0 12.0 34.0 5 24.126475352927564 23.0 11.0 34.0 11.0 34.0 6 25.35119185373756 27.0 12.0 37.0 11.0 38.0 7 26.367970377227493 28.0 12.0 37.0 12.0 38.0 8 25.71985651469567 27.0 11.0 37.0 11.0 38.0 9 26.93959731543624 31.0 12.0 37.0 12.0 38.0 10-11 26.134691043739878 28.0 11.0 38.0 11.0 38.0 12-13 26.39956028697061 29.5 11.0 37.5 11.0 38.0 14-15 25.323825503355707 27.0 11.0 37.0 11.0 38.0 16-17 25.55768340661884 27.0 11.0 37.0 11.0 38.0 18-19 25.993288590604028 28.0 11.5 37.0 11.0 38.0 20-21 25.08638046748438 26.5 11.0 36.5 11.0 38.0 22-23 25.23108076834066 27.0 11.0 36.0 11.0 38.0 24-25 25.366871094654016 26.5 11.0 37.0 11.0 38.0 26-27 24.595174728072205 25.0 11.0 36.5 11.0 38.0 28-29 25.318329090488312 26.0 11.0 37.0 11.0 38.0 30-31 25.68016662809535 26.5 11.0 38.0 11.0 38.0 32-33 25.90048599861143 27.0 11.0 38.0 11.0 38.0 34-35 26.024126359638974 27.0 11.0 38.0 11.0 38.0 36-37 25.367507521407084 26.5 11.0 36.5 11.0 38.0 38-39 25.26434853043277 26.5 16.0 35.5 11.0 38.0 40-41 24.649386716037952 26.0 11.0 36.5 11.0 38.0 42-43 25.052707706549413 26.0 11.0 37.0 11.0 38.0 44-45 25.83875260356399 27.0 11.0 38.0 11.0 38.0 46-47 25.32376764637815 26.5 11.0 37.0 11.0 38.0 48-49 24.433464475815782 25.5 11.0 36.0 11.0 38.0 50-51 23.955045128442492 24.0 11.0 34.0 11.0 38.0 52-53 24.90210599398287 25.5 11.0 37.0 11.0 38.0 54-55 24.622251793566306 25.0 11.0 36.5 11.0 38.0 56-57 24.884806757694975 25.5 11.0 37.5 11.0 38.0 58-59 25.33018977088637 26.0 11.0 37.5 11.0 38.0 60-61 25.833545475584355 27.0 11.0 38.0 11.0 38.0 62-63 25.96464938671604 27.0 11.0 38.0 11.0 38.0 64-65 25.80392270307799 27.0 11.0 38.0 11.0 38.0 66-67 25.184795186299468 26.0 11.0 37.0 11.0 38.0 68-69 24.847489007174264 25.0 11.0 37.0 11.0 38.0 70-71 24.68768803517704 25.0 11.0 36.5 11.0 38.0 72-73 24.200300856283267 25.0 11.0 35.0 11.0 38.0 74-75 24.295591298310576 24.5 11.0 36.5 11.0 38.0 76 24.24149502429993 25.0 11.0 37.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 6.0 13 76.0 14 215.0 15 306.0 16 545.0 17 670.0 18 774.0 19 771.0 20 622.0 21 453.0 22 297.0 23 193.0 24 129.0 25 116.0 26 109.0 27 81.0 28 85.0 29 99.0 30 102.0 31 153.0 32 207.0 33 324.0 34 490.0 35 682.0 36 795.0 37 342.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.16778523489933 18.224947928720205 17.646378153205276 38.96088868317519 2 14.313816246239297 12.601249710715113 51.86299467715807 21.221939365887525 3 14.61467252950706 12.84424901643138 47.801434853043276 24.739643601018283 4 12.994677158065263 26.162925248785 25.48021291367739 35.36218467947235 5 12.242536449895859 22.182365193242305 45.174728072205504 20.40037028465633 6 22.67993520018514 33.013191390881744 15.251099282573477 29.05577412635964 7 19.717657949548713 18.629946771580652 21.441795880583197 40.210599398287435 8 16.454524415644528 35.32747049294145 16.547095579726914 31.67090951168711 9 17.56537838463319 15.494098588289749 18.537375607498262 48.4031474195788 10-11 18.844017588521176 22.76672066651238 28.558204119416803 29.83105762554964 12-13 18.334876186068037 15.94538301319139 34.500115713955104 31.21962508678547 14-15 24.271002082851194 21.34922471650081 22.153436704466557 32.22633649618144 16-17 29.478130062485537 17.177736635038183 21.783152048137005 31.56098125433927 18-19 18.305947697292293 16.57602406850266 31.17912520249942 33.93890303170563 20-21 29.159916685952325 15.725526498495718 23.17750520712798 31.937051608423978 22-23 30.849340430455914 15.0890997454293 21.412867391807453 32.648692432307335 24-25 19.630872483221477 22.951862994677157 20.654940985882895 36.76232353621847 26-27 28.1937051608424 21.42443878731775 22.303864846100442 28.077991205739412 28-29 21.337653320990512 21.36079611201111 24.166859523258506 33.13469104373987 30-31 20.290442027308494 21.57486692895163 25.40499884286045 32.72969220087943 32-33 22.193936588752603 20.811154825271927 25.173570932654478 31.82133765332099 34-35 20.302013422818792 20.261513538532746 25.804211987965747 33.63226105068271 36-37 28.66813237676464 14.770886368896088 31.16176810923397 25.3992131451053 38-39 28.88798889146031 11.808609118259662 36.58296690580884 22.720435084471188 40-41 23.704003702846563 23.87178893774589 22.76672066651238 29.657486692895162 42-43 17.721592224022217 24.36935894468873 26.573709789400603 31.33533904188845 44-45 17.30502198565147 17.36866466095811 31.21962508678547 34.10668826660495 46-47 28.806989122888222 16.367738949317285 25.023142791020597 29.802129136773896 48-49 27.586206896551722 16.558666975237212 28.824346216153668 27.030779912057394 50-51 40.499884286044896 13.156676695209443 22.963434390187455 23.380004628558204 52-53 16.998380004628558 19.60194399444573 29.7789863457533 33.62068965517241 54-55 27.88706317981949 16.228882203193706 24.91321453367276 30.970840083314048 56-57 27.875491784309187 16.946308724832214 23.10807683406619 32.07012265679241 58-59 17.953020134228186 20.33094191159454 28.32677620921083 33.38926174496644 60-61 18.58944688729461 18.65308956260125 27.372136079611202 35.38532747049294 62-63 18.537375607498262 21.812080536912752 26.25549641286739 33.39504744272159 64-65 18.2596621152511 23.171719509372828 26.457995834297616 32.110622541078456 66-67 16.47766720666512 31.711409395973156 18.358018977088637 33.452904420273086 68-69 17.057223861598104 31.74796042353758 18.08135161719609 33.11346409766823 70-71 16.75538069891229 34.45961582966906 17.085165470955797 31.699838000462854 72-73 15.47095579726915 36.600323999074284 16.2751677852349 31.65355241842166 74-75 19.509372830363343 26.180282342050454 20.31358481832909 33.996760009257116 76 19.798657718120804 23.73293219162231 22.321221939365888 34.147188150891 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 1.0 20 1.5 21 1.0 22 1.5 23 4.0 24 8.0 25 10.0 26 10.5 27 14.0 28 26.0 29 35.0 30 35.0 31 47.0 32 71.5 33 84.0 34 90.5 35 114.0 36 157.5 37 184.0 38 190.5 39 205.0 40 245.5 41 280.0 42 282.0 43 320.0 44 352.0 45 368.5 46 391.0 47 379.0 48 381.0 49 390.0 50 385.0 51 356.5 52 313.0 53 315.5 54 333.0 55 309.0 56 274.5 57 275.5 58 287.0 59 285.5 60 280.5 61 256.5 62 236.0 63 247.0 64 251.5 65 241.5 66 236.0 67 234.0 68 228.5 69 212.0 70 188.0 71 175.0 72 157.0 73 126.5 74 107.5 75 101.0 76 88.5 77 68.5 78 47.0 79 33.0 80 31.0 81 22.0 82 11.5 83 8.0 84 7.0 85 6.0 86 4.0 87 2.0 88 1.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0057856977551492715 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 8642.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 99.57185836611896 #Duplication Level Percentage of deduplicated Percentage of total 1 99.59325973271353 99.16685952325851 2 0.38349796629866356 0.7637121036797038 3 0.023242300987797792 0.06942837306179125 4 0.0 0.0 5 0.0 0.0 6 0.0 0.0 7 0.0 0.0 8 0.0 0.0 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.011571395510298541 0.0 19 0.0 0.0 0.0 0.023142791020597082 0.0 20 0.0 0.0 0.0 0.05785697755149271 0.0 21 0.0 0.0 0.0 0.09257116408238833 0.0 22 0.0 0.0 0.0 0.24299930571626938 0.0 23 0.0 0.0 0.0 0.24299930571626938 0.0 24 0.0 0.0 0.0 0.31242767877806066 0.0 25 0.0 0.0 0.0 0.31242767877806066 0.0 26 0.0 0.0 0.0 0.31242767877806066 0.0 27 0.0 0.0 0.0 0.31242767877806066 0.0 28 0.0 0.0 0.0 0.34714186530895624 0.0 29 0.0 0.0 0.0 0.34714186530895624 0.0 30 0.0 0.0 0.0 0.3587132608192548 0.0 31 0.0 0.0 0.0 0.3587132608192548 0.0 32 0.0 0.0 0.0 0.3587132608192548 0.0 33 0.0 0.0 0.0 0.3702846563295533 0.0 34 0.0 0.0 0.0 0.4165702383707475 0.0 35 0.0 0.0 0.0 0.4628558204119417 0.0 36 0.0 0.0 0.0 0.5091414024531359 0.0 37 0.0 0.0 0.0 0.6248553575561213 0.0 38 0.0 0.0 0.0 0.7058551261282111 0.0 39 0.0 0.0 0.0 0.8099976857208979 0.0 40 0.0 0.0 0.0 0.960425827354779 0.0 41 0.0 0.0 0.0 1.11085396898866 0.0 42 0.0 0.0 0.0 1.2959962971534367 0.0 43 0.0 0.0 0.0 1.388567461235825 0.0 44 0.0 0.0 0.0 1.5737097894006018 0.0 45 0.0 0.0 0.0 1.66628095348299 0.0 46 0.0 0.0 0.0 1.793566304096274 0.0 47 0.0 0.0 0.0 2.001851423281648 0.0 48 0.0 0.0 0.0 2.0597084008331406 0.0 49 0.0 0.0 0.0 2.1175653783846333 0.0 50 0.0 0.0 0.0 2.30270770654941 0.0 51 0.0 0.0 0.0 2.476278639203888 0.0 52 0.0 0.0 0.0 2.5919925943068733 0.0 53 0.0 0.0 0.0 2.8465632955334415 0.0 54 0.0 0.0 0.0 3.066419810229114 0.0 55 0.0 0.0 0.0 3.1474195788012036 0.0 56 0.0 0.0 0.0 3.2862763249247857 0.0 57 0.0 0.0 0.0 3.482990048599861 0.0 58 0.0 0.0 0.0 3.610275399213145 0.0 59 0.0 0.0 0.0 3.737560749826429 0.0 60 0.0 0.0 0.0 3.818560518398519 0.0 61 0.0 0.0 0.0 3.9342744735015045 0.0 62 0.0 0.0 0.0 3.9574172645221015 0.0 63 0.0 0.0 0.0 4.061559824114788 0.0 64 0.0 0.0 0.0 4.130988197176579 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGACTCT 20 7.490427E-5 70.00001 13 TTCCGAC 20 7.490427E-5 70.00001 19 CTGACTC 20 7.490427E-5 70.00001 12 TGCCTAC 25 2.6084563E-6 70.00001 19 GCTGCCT 20 7.490427E-5 70.00001 17 TCCACAT 20 7.490427E-5 70.00001 5 CTGCCTA 25 2.6084563E-6 70.00001 18 CTTCCGA 20 7.490427E-5 70.00001 18 ATCCACA 15 0.0021503684 70.0 4 GCCTACG 15 0.0021503684 70.0 20 GTATCCT 15 0.0021503684 70.0 57 TCTCGTT 15 0.0021503684 70.0 43 AGATCTC 15 0.0021503684 70.0 40 CTCGTTT 15 0.0021503684 70.0 44 TAGATCT 15 0.0021503684 70.0 39 CCACATC 30 7.697397E-6 58.333332 6 TCCGACG 30 7.697397E-6 58.333332 20 TATACCC 25 2.2596578E-4 56.000004 3 CTTATCC 25 2.2596578E-4 56.000004 1 TCTGACT 25 2.2596578E-4 56.000004 11 >>END_MODULE