SRR1779682_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779682_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	465162
Sequences flagged as poor quality	0
Sequence length	76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCGT	14047	3.019808152858574	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCG	1928	0.4144792566890675	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCC	818	0.17585271367824543	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	1590	58.10473	70
CGTATGC	2495	53.462086	41
TCGTATG	2580	53.31191	40
CTCGTAT	2530	52.982155	39
CCGTCTT	2395	52.93399	47
GTATGCC	2495	52.49113	42
TCTCGTA	2520	52.3591	38
TATGCCG	2505	52.141792	43
GTCTTCT	2485	51.9866	49
CTTGAAA	2570	51.748985	57
CGTCTTC	2495	51.37385	48
TTGAAAA	2635	51.136555	58
ATCTCGT	2570	51.068077	37
CTGCTTG	2475	51.065014	54
GCCGTCT	2510	50.92731	46
TTCTGCT	2490	50.61679	52
CTTCTGC	2540	50.30957	51
TGCTTGA	2570	50.261795	55
AATCTCG	2620	50.22168	36
ATGCCGT	2600	50.10193	44