SRR1779678_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779678_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	353050
Sequences flagged as poor quality	0
Sequence length	76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	20564	5.824670726525988	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTATCG	20	0.0069480687	52.5	24
CATCGTT	55	6.686034E-6	38.18182	32
TCGTTGT	60	1.2141645E-5	35.000004	34
TACATAT	40	0.0024171714	35.0	5
AGTTGCG	40	0.0024171714	35.0	24
GTATAGC	40	0.0024171714	35.0	1
CTTACCG	40	0.0024171714	35.0	9
ATATTAG	65	2.0999187E-5	32.307693	51
TTGGACG	45	0.0043044584	31.111109	4
CTTTATA	45	0.0043044584	31.111109	37
TTGGGCG	45	0.0043044584	31.111109	2
TCTATAG	45	0.0043044584	31.111109	3
GCCGTAT	70	3.4840672E-5	30.000002	54
AACCACG	95	2.8152317E-7	29.473682	7
CGTATCA	75	5.5772696E-5	28.0	56
GTAGACG	50	0.0072037103	27.999998	4
TACCTTG	50	0.0072037103	27.999998	14
TACCCCG	80	8.653986E-5	26.25	5
TTCACTA	80	8.653986E-5	26.25	37
AGTTGGC	80	8.653986E-5	26.25	56