SRR1779677_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779677_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	471949
Sequences flagged as poor quality	0
Sequence length	76
%GC	64

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	27282	5.780709356307567	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTACTCT	15	0.0022240898	70.0	4
CCTTACG	20	0.006949512	52.5	3
CGTCTAA	20	0.006949512	52.5	9
CTCTCTA	30	5.8758626E-4	46.666664	55
GTGTATA	65	1.0002623E-8	43.076923	1
TAACTTA	35	0.0012550168	40.0	59
GTATAAG	75	3.5346602E-8	37.333336	3
CGTATCA	85	2.572051E-9	37.058823	56
TGTATAA	100	3.255991E-10	35.000004	2
TAGTGCT	50	1.7089587E-4	35.000004	4
ATGTATG	40	0.0024179937	35.0	1
GTCAGTT	40	0.0024179937	35.0	43
AATACCC	40	0.0024179937	35.0	3
ATCATTA	90	4.498361E-9	34.999996	59
TATCATT	95	7.625204E-9	33.157898	58
TCATTAA	100	1.2571036E-8	31.500002	60
CCGTAAC	45	0.0043059136	31.111109	1
TATAAGA	90	1.7549974E-7	31.111109	4
CATTAAA	105	2.021261E-8	29.999998	61
GTATCAT	105	2.021261E-8	29.999998	57