SRR1779671_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779671_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	222365
Sequences flagged as poor quality	0
Sequence length	76
%GC	68

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	29308	13.18013176534077	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	273	0.12277111955568548	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	257	0.11557574258538889	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATTAAA	35	3.6961865E-9	70.00001	61
CTTTACG	15	0.002222539	70.0	2
TCATTAA	40	1.061926E-8	61.25	60
ATTAAAA	50	9.767973E-10	55.999996	62
TCCTAGC	20	0.0069447015	52.5	65
GTGCTTT	20	0.0069447015	52.5	33
GTATCTA	20	0.0069447015	52.5	47
GACATAA	20	0.0069447015	52.5	14
ATCATTA	40	7.45682E-7	52.5	59
TATGTGC	20	0.0069447015	52.5	3
TAATGCA	20	0.0069447015	52.5	2
TATCATT	35	2.0819954E-5	50.000004	58
AATGCAC	30	5.8691227E-4	46.666664	3
TAGATCT	55	1.3062345E-7	44.545456	39
TATAAGA	40	4.5828005E-5	43.75	2
AATATAA	35	0.0012535858	40.000004	43
ATAAGAG	35	0.0012535858	40.000004	3
GTATAAG	35	0.0012535858	40.000004	1
CGTATCA	55	6.6748726E-6	38.18182	56
GCCGTAT	60	1.2121471E-5	35.0	54