SRR1779670_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779670_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	609743
Sequences flagged as poor quality	0
Sequence length	76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCGT	8371	1.3728734893225507	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCG	1607	0.2635536611326411	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	891	0.14612713881094166	No Hit
ATTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCGT	842	0.13809096619395383	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCC	673	0.11037437084148569	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTATG	1480	51.082874	40
CTCGTAT	1420	50.77227	39
CGTATGC	1455	50.293182	41
AGGGGGG	950	50.098804	70
GTATGCC	1420	49.81091	42
CTTGAAA	1550	48.997704	57
CCGTCTT	1480	48.509285	47
TCTCGTA	1495	48.455296	38
GTCTTCT	1560	47.81367	49
TTGAAAA	1610	47.602562	58
TTCTGCT	1560	46.68745	52
TCTGCTT	1580	46.318092	53
TATGCCG	1560	45.789616	43
GCCGTCT	1560	45.568897	46
GCTTGAA	1675	45.13221	56
TGAAAAA	1745	44.922577	59
TCTTCTG	1645	44.9173	50
AATCTCG	1660	44.693035	36
ATCTCGT	1635	44.520252	37
TGCTTGA	1670	44.226738	55