SRR1779667_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779667_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	321564
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCCGT	9166	2.850443457600975	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCCG	1572	0.4888606933611972	No Hit
ATTATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCCGT	1116	0.34705377467626974	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1041	0.3237302683136172	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCC	849	0.2640220920252267	No Hit
CATATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCCGT	326	0.10137950765632968	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	1170	58.326332	70
TATGCCG	1875	51.724594	43
TCGTATG	2035	51.590862	40
CTCGTAT	2010	51.536102	39
CGTATGC	1970	51.532692	41
ATCTCGT	2035	51.07495	37
CGTATGA	110	50.91882	41
GTATGCC	1925	50.744858	42
CCGTCTT	1850	50.736065	47
TCTCGTA	2045	50.65407	38
ATGCCGT	1910	50.59345	44
GCCGTCT	1900	50.499043	46
CGTCTTC	1935	50.317326	48
GTCTTCT	1960	50.19597	49
TATGACG	105	50.017334	43
TGCCGTC	1940	49.811073	45
GCTTGAA	2045	49.64274	56
CTTGAAA	2045	49.635017	57
TCTTCTG	1990	49.439243	50
CTTCTGC	2050	49.35857	51