SRR1779665_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779665_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	508997
Sequences flagged as poor quality	0
Sequence length	76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

$Sequence length distribution$

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCCGT	11128	2.186260429825716	No Hit
TCTTATACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCCG	2041	0.40098468163859513	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1352	0.26562042605359165	No Hit
ATTATACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCCGT	1175	0.23084615429953417	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCC	1009	0.19823299547934467	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	1480	52.24972	70
TATGCCG	2355	50.135742	43
TCGTATG	2505	49.88178	40
CGTATGC	2445	49.83708	41
CTCGTAT	2450	49.56809	39
GCCGTCT	2355	49.550404	46
ATGCCGT	2395	49.444687	44
CCGTCTT	2305	49.40903	47
CGTCTTC	2395	49.3081	48
TCTCGTA	2470	49.161896	38
CGTATGA	100	49.020782	41
GTATGCC	2410	48.981926	42
ATCTCGT	2485	48.583504	37
TGCCGTC	2425	48.553596	45
CTTGAAA	2515	47.735073	57
AATCTCG	2525	47.670586	36
CTGCTTG	2470	47.352665	54
GTCTTCT	2540	46.884094	49
CTTCTGC	2565	46.017483	51
TGCTTGA	2535	45.991306	55