SRR1779658_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779658_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	972505
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCGT	7021	0.7219500156811532	No Hit
CATATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCGT	2633	0.27074410928478515	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCG	1730	0.17789111624104761	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1479	0.15208148030087248	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	1445	51.09788	70
TCGTATG	2045	48.267605	40
TATGCCG	1925	48.030697	43
CGTATGC	1970	47.462	41
CTCGTAT	2000	47.423607	39
ATCTCGT	2005	47.29805	37
TCTCGTA	2015	47.068153	38
AATCTCG	1990	46.772923	36
ATGCCGT	1965	46.342438	44
CGTCTTC	2015	46.2473	48
CCGTCTT	1970	45.70086	47
GCCGTCT	1990	45.593624	46
GTATGCC	2015	45.535446	42
CGTATGA	125	44.82404	41
TGCCGTC	2055	44.14695	45
CGTCAAT	2205	43.799225	32
GTCAATC	2110	43.4495	33
CTGCTTG	2210	42.149303	54
TCGTCAA	2430	40.31974	31
GTCTTCT	2310	40.18133	49