SRR1779656_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779656_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	188806
Sequences flagged as poor quality	0
Sequence length	76
%GC	63

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAATGGTAGATCTCGTATGCCGT	4359	2.3087190025740707	No Hit
CATATACACATCTCCGAGCCCACGAGACAATGGTAGATCTCGTATGCCGT	1665	0.88185756808576	No Hit
TCTTATACACATCTCCGAGCCCACGAGACAATGGTAGATCTCGTATGCCG	1108	0.5868457570204336	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	917	0.4856837176784636	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACAATGGTAGATCTCGTATGCC	394	0.20867980890437807	No Hit
CTTAAACACATCTCCGAGCCCACGAGACAATGGTAGATCTCGTATGCCGT	229	0.12128851837335677	No Hit
CATAAACACATCTCCGAGCCCACGAGACAATGGTAGATCTCGTATGCCGT	217	0.11493278815291888	No Hit
ATTATACACATCTCCGAGCCCACGAGACAATGGTAGATCTCGTATGCCGT	202	0.10698812537737148	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATTA	15	0.002212458	70.07611	48
CTAATGA	15	0.002212458	70.07611	51
ATCTAGT	25	2.8358136E-6	69.983315	37
CATTATA	15	0.0022241191	69.983315	2
AGGGGGG	735	0.0	60.461777	70
CATAAAC	100	0.0	59.48582	1
TCTAGTA	30	8.364919E-6	58.31943	38
GTATTAT	25	2.3731215E-4	56.060883	49
TCTGATT	25	2.376234E-4	56.046024	53
TGCTAGA	100	0.0	56.016323	55
ATAAAAC	25	2.3887164E-4	55.986652	1
AAAACAC	145	0.0	55.50401	3
TAAAACA	70	0.0	54.986893	2
GATCTAG	45	2.6924681E-8	54.431473	36
TTATGCT	40	7.395065E-7	52.557083	52
TAATGAT	20	0.0069133006	52.557083	52
AGATAGT	20	0.006927817	52.52922	54
TTTCCGT	20	0.006927817	52.52922	54
CTGCTAG	100	0.0	52.529217	54
TGTAGTG	20	0.006942356	52.501392	41