SRR1779655_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779655_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	355477
Sequences flagged as poor quality	0
Sequence length	76
%GC	62

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	14927	4.199146498929608	No Hit
CTTATACACATCTGACGCTGCCGACGATATGCAGTGTGTAGATCTCGGTG	715	0.20113818896862526	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAACGTT	20	0.006948492	52.499264	26
TCATTAA	145	0.0	38.62558	60
ATCATTA	140	0.0	37.50475	59
CGTATCA	155	0.0	36.128525	56
TATCATT	140	0.0	35.004433	58
ATTAAAA	150	0.0	35.004433	62
GATCTTT	50	1.7082534E-4	34.999504	22
GTATCAT	155	0.0	33.87526	57
CATTAAA	160	0.0	32.816658	61
ATCTTTG	55	2.9895725E-4	31.817734	23
GTACCTC	45	0.0043047937	31.110674	6
TGTGTTT	70	3.4844677E-5	29.999578	32
GTAACAA	70	3.4844677E-5	29.999578	50
TAGATCT	200	0.0	29.74958	39
TGTCAGA	50	0.007204271	27.999605	27
GTATTGA	50	0.007204271	27.999605	16
TTACGCC	50	0.007204271	27.999605	4
ATAAACT	50	0.007204271	27.999605	4
CGTTTTG	50	0.007204271	27.999605	34
GCCGTAT	220	0.0	27.045074	54