SRR1779654_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779654_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	563059
Sequences flagged as poor quality	0
Sequence length	76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCCGT	5753	1.0217401728770874	No Hit
CATATACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCCGT	2317	0.41150216939965445	No Hit
TCTTATACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCCG	1486	0.26391550441427986	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1259	0.22360001349769743	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACATCACTCGATCTCGTATGCC	629	0.11171120610806327	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	1075	52.734684	70
TCGTATG	1640	48.445	40
CTCGTAT	1635	47.518593	39
TTGAAAA	1675	47.22796	58
GTATGCC	1630	47.062042	42
CGTATGC	1645	47.05041	41
CTTGAAA	1645	47.025333	57
TGAAAAA	1765	46.009636	59
TCTCGTA	1690	45.765053	38
GTCTTCT	1680	44.386715	49
CCGTCTT	1660	44.312416	47
TATGCCG	1730	44.139217	43
GAAAAAA	1940	43.8362	60
GCTTGAA	1750	43.80767	56
TCTTCTG	1730	43.50859	50
TTCTGCT	1740	43.459743	52
TCTGCTT	1750	43.01517	53
CTTCTGC	1770	42.129765	51
GCCGTCT	1755	42.11333	46
ATATACA	685	41.890263	2