SRR1779653_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779653_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	237625
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCCGT	7598	3.197475013150973	No Hit
CATATACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCCGT	2821	1.1871646501841135	No Hit
TCTTATACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCCG	1957	0.8235665439242503	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1672	0.703629668595476	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCC	657	0.27648605996843767	No Hit
CATAAACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCCGT	387	0.1628616517622304	No Hit
CTTAAACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCCGT	364	0.15318253550762756	No Hit
TCTTTATACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCC	297	0.12498684902682798	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCGTAT	15	0.0022119274	70.08599	46
AACGTTT	15	0.0022249008	69.98275	16
AGGGGGG	1470	0.0	59.509136	70
ACGTATG	25	2.390075E-4	55.98619	40
GCCGTAA	20	0.0069116396	52.564487	46
TGACGTA	20	0.006917403	52.553413	45
CTTGACT	20	0.0069289412	52.531273	49
AATCGTA	20	0.006952061	52.487057	38
CGTATGC	2330	0.0	51.554302	41
TATGCCG	2240	0.0	51.291336	43
GTATGCC	2270	0.0	50.922096	42
TCGTATG	2435	0.0	50.87041	40
CTCGTAT	2375	0.0	50.68224	39
CCGTCTT	2190	0.0	50.56432	47
TCTCGTA	2405	0.0	50.34102	38
ATGCCGT	2285	0.0	50.28122	44
CGTCTTA	35	2.067357E-5	50.06142	48
AATCTCG	2440	0.0	50.049137	36
GTCTTCT	2335	0.0	49.794098	49
GCCGTCT	2255	0.0	49.728416	46