SRR1779650_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779650_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	535442
Sequences flagged as poor quality	0
Sequence length	76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	19200	3.585822554076819	No Hit
CTTATACACATCTGACGCTGCCGACGATATGCAGTGTGTAGATCTCGGTG	1246	0.2327049428322769	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATCA	290	0.0	43.448277	56
CCGTATC	315	0.0	40.0	55
GTATCAT	320	0.0	39.375	57
TAGATCT	370	0.0	38.783783	39
GCCGTAT	335	0.0	38.65672	54
GTAGATC	400	0.0	34.125	38
AGATCTC	415	0.0	33.73494	40
CATTAAA	385	0.0	33.636364	61
ATCATTA	375	0.0	33.600002	59
TATCATT	390	0.0	32.307693	58
TCATTAA	415	0.0	32.048195	60
TGTGTAG	400	0.0	31.499998	35
TGTAGAT	435	0.0	31.37931	37
CGCCGTA	415	0.0	31.20482	53
TCTCGGT	445	0.0	29.88764	43
GTGTGTA	430	0.0	29.302326	34
CGGTGGT	470	0.0	29.042553	46
AGTGTGT	435	0.0	28.160921	33
TCGGTGG	485	0.0	28.14433	45
GCGTTAT	50	0.0072069843	27.999998	11