SRR1779650_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779650_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	535442
Sequences flagged as poor quality	0
Sequence length	76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAGTAGATTATCTCGTATGCCGT	7422	1.3861445310603202	No Hit
CATATACACATCTCCGAGCCCACGAGACAGTAGATTATCTCGTATGCCGT	2588	0.4833389984349378	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	2045	0.38192745432745284	No Hit
TCTTATACACATCTCCGAGCCCACGAGACAGTAGATTATCTCGTATGCCG	1814	0.3387855267237161	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACAGTAGATTATCTCGTATGCC	685	0.12793169008034483	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	1335	54.261192	70
TCGTATG	2140	49.230484	40
CGTATGC	2070	49.049065	41
CTCGTAT	2160	48.612606	39
GTATGCC	2070	48.546196	42
TCTCGTA	2260	48.005836	38
CCGTCTT	1900	47.932026	47
TATGCCG	2110	47.298424	43
TTATCTC	2240	46.711456	35
GATTATC	2310	46.053417	33
CGTCTTC	1960	45.749874	48
CTTGAAA	2145	45.689045	57
GCCGTCT	2020	45.257977	46
GTCTTCT	1915	45.157642	49
ATCTCGT	2395	45.153744	37
ATTATCT	2340	45.01434	34
ATGCCGT	2200	44.88598	44
TATCTCG	2385	44.462616	36
TGAAAAA	2540	43.958042	59
TTGAAAA	2290	43.71313	58