SRR1779634_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779634_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	477863
Sequences flagged as poor quality	0
Sequence length	76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCGT	10636	2.2257425245310896	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCG	1896	0.3967664372424733	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1331	0.2785317130642046	No Hit
ATTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCGT	1085	0.22705252342198495	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCC	1037	0.21700780349179577	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	1300	54.636524	70
CTTGAAA	2165	47.058517	57
CTCGTAT	2155	46.932304	39
TCGTATG	2220	46.829086	40
TCTCGTA	2180	46.715153	38
CGTATGC	2185	46.477272	41
CCGTCTT	2120	46.444843	47
GTATGCC	2155	46.33121	42
TCTTCTG	2185	46.32186	50
TTGAAAA	2240	46.25955	58
GTCTTCT	2190	46.216103	49
AATCTCG	2235	45.40898	36
TGAAAAA	2375	44.956646	59
TGCTTGA	2240	44.876495	55
TATGCCG	2230	44.615887	43
TCTGCTT	2270	44.442364	53
GCCGTCT	2235	44.05507	46
GAAAAAA	2480	43.895596	60
CTGCTTG	2275	43.724213	54
CGTCTTC	2295	43.666702	48