SRR1779627_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779627_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	446988
Sequences flagged as poor quality	0
Sequence length	76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTATGCCGT	8147	1.8226440083402689	No Hit
TCTTATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTATGCCG	1231	0.2753988921402812	No Hit
ATTATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTATGCCGT	992	0.2219298952097148	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	969	0.2167843432038444	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTATGCC	824	0.18434499360161793	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	895	52.77853	70
CTCGTAT	1670	52.590073	39
TCGTATG	1670	52.590073	40
CCGTCTT	1420	52.07989	47
CGTATGC	1630	51.995193	41
TCTCGTA	1740	51.680946	38
CTTGAAA	1540	51.37801	57
TTGAAAA	1585	50.802856	58
GTATGCC	1775	50.73567	42
TCTGCTT	1175	50.382706	53
TATGCCG	1790	50.310513	43
TCTTCTG	1155	50.013992	50
GCCGTCT	1475	49.900303	46
TGAAAAA	2135	49.850014	59
GTCTTCT	1175	48.86473	49
ATCTCGT	1875	48.706375	37
GCTTGAA	1600	48.138466	56
CGTCTTA	255	48.106503	48
GGATCTC	1990	47.64999	35
CTGCTTG	1235	47.64066	54