SRR1779626_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779626_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	529426
Sequences flagged as poor quality	0
Sequence length	76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	23188	4.379837786583961	No Hit
CTTATACACATCTGACGCTGCCGACGATCTACTCTGTGTAGATCTCGGTG	2252	0.4253663401495204	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCGTAT	385	0.0	44.544495	54
CGTATCA	395	0.0	43.416782	56
GTATCAT	425	0.0	40.35207	57
CCGTATC	455	0.0	37.691498	55
TCTCGGT	480	0.0	37.1867	43
TCATTAA	470	0.0	35.743908	60
AGATCTC	495	0.0	35.35277	40
GGTCTAA	40	0.0024162738	35.00586	1
TAGATCT	510	0.0	34.999245	39
TCGGTGG	545	0.0	34.03596	45
GTAGATC	505	0.0	33.959663	38
ATCATTA	495	0.0	33.93866	59
TATCATT	515	0.0	32.620655	58
CGCCGTA	540	0.0	31.758574	53
CATTAAA	535	0.0	31.401192	61
CGGTGGT	585	0.0	31.11044	46
TGTAGAT	590	0.0	30.253586	37
CTGTGTA	600	0.0	29.74936	34
GTGTAGA	645	0.0	29.301695	36
TGGTCGC	620	0.0	28.225199	49