SRR1779622_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779622_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	274754
Sequences flagged as poor quality	0
Sequence length	76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCGT	7017	2.5539209620242107	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCGT	5235	1.9053407775682973	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	2465	0.8971661923029329	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCG	2076	0.7555849960328148	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCC	581	0.2114618895448292	No Hit
ATCTTATACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCC	508	0.18489266762267337	No Hit
ATTAAACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCGT	382	0.13903346266114416	No Hit
CTTAAACACATCTCCGAGCCCACGAGACTTTCGTCAATCTCGTATGCCGT	282	0.10263726824723206	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTTATA	30	1.0221447E-7	69.99254	2
ATTATAC	1075	0.0	61.853874	1
AGGGGGG	1385	0.0	60.643356	70
TATCGTA	110	0.0	57.26662	38
ATTAAAC	185	0.0	54.85902	1
ATATCGT	115	0.0	54.776768	37
CCGTCTT	2125	0.0	52.903465	47
CCATTAC	20	0.006939366	52.513515	42
TCTAGAA	20	0.0069443644	52.503956	57
CGTAAAC	20	0.006949365	52.494404	32
TCTTTAT	40	7.468825E-7	52.494404	1
TCAGTAA	20	0.006949365	52.494404	10
GTCTTCT	2215	0.0	52.31595	49
TCGTATG	2335	0.0	52.157177	40
GTATGCC	2230	0.0	52.12104	42
CTTGAAA	2250	0.0	52.115044	57
TCTTCTG	2225	0.0	52.080822	50
CGTCTTC	2235	0.0	52.023376	48
CGTATGC	2230	0.0	51.95459	41
TTGAAAA	2325	0.0	51.788853	58