SRR1779620_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779620_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	476400
Sequences flagged as poor quality	0
Sequence length	76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTATACACATCTCCGAGCCCACGAGACAATGGTAGATCTCGTATGCCGT	4383	0.9200251889168766	No Hit
CTTATACACATCTCCGAGCCCACGAGACAATGGTAGATCTCGTATGCCGT	3180	0.6675062972292191	No Hit
TCTTATACACATCTCCGAGCCCACGAGACAATGGTAGATCTCGTATGCCG	1256	0.26364399664147775	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1208	0.25356842989084805	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATTATAC	620	59.25633	1
AGGGGGG	865	55.416824	70
TCGTATG	1340	49.883495	40
CTCGTAT	1300	49.528732	39
CGTATGC	1285	48.796505	41
GTATGCC	1275	48.365154	42
TGAAAAA	1495	47.067375	59
CTTGAAA	1390	46.85484	57
TTGAAAA	1455	46.677097	58
TCTCGTA	1405	46.574482	38
CCGTCTT	1185	46.425552	47
TAGATCT	1350	45.875057	34
GAAAAAA	1640	45.676144	60
GTCTTCT	1295	45.429867	49
AGATCTC	1440	44.95173	35
TATGCCG	1380	44.435974	43
GCTTGAA	1465	44.22641	56
TGCTTGA	1390	44.097748	55
TCTTCTG	1345	44.001385	50
TCTGCTT	1360	43.52522	53