SRR1779619_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779619_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	274481
Sequences flagged as poor quality	0
Sequence length	76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCCGT	5474	1.9943092600216408	No Hit
CTTATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCCGT	3749	1.3658504595946532	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1730	0.6302804201383703	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCCG	1433	0.5220762092822454	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCC	446	0.1624884782553255	No Hit
ATCTTATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCC	402	0.14645822479515885	No Hit
ATTAAACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCCGT	288	0.10492529537563619	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAATACG	15	0.0022250465	69.98451	4
ATTATAC	950	0.0	62.26072	1
GTATGAC	115	0.0	60.911587	42
AGGGGGG	1075	0.0	60.870255	70
CGTCAGT	30	8.374149E-6	58.32043	32
CGTATGA	130	0.0	56.57749	41
CGTCTTA	25	2.3775456E-4	56.048878	48
ATCGTAT	85	0.0	53.52732	39
GGGTACT	20	0.006922496	52.545822	47
TAAGACG	20	0.006927491	52.536243	43
GCGCTTA	20	0.00693749	52.517086	55
GCTTATA	20	0.0069474992	52.49795	1
ACGTTTA	20	0.0069525084	52.488384	27
GAAGTTA	40	7.4747004E-7	52.488384	26
ACAGATA	90	0.0	50.544376	33
TCGTATG	1945	0.0	50.212845	40
TATGACG	140	0.0	50.034515	43
TGAAAAA	2020	0.0	49.88995	59
CTTGAAA	1900	0.0	49.550694	57
TTGAAAA	1935	0.0	49.368923	58