SRR1779616_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779616_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	362007
Sequences flagged as poor quality	0
Sequence length	76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTATACACATCTCCGAGCCCACGAGACTTGCTAAGATCTCGTATGCCGT	6855	1.8936097920758437	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTGCTAAGATCTCGTATGCCGT	5344	1.4762145483374631	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1971	0.5444646098003629	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTTGCTAAGATCTCGTATGCCG	1925	0.5317576731941647	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTTGCTAAGATCTCGTATGCC	403	0.11132381418038878	No Hit
ATTAAACACATCTCCGAGCCCACGAGACTTGCTAAGATCTCGTATGCCGT	375	0.10358915711574637	No Hit
ATCTTATACACATCTCCGAGCCCACGAGACTTGCTAAGATCTCGTATGCC	374	0.10331291936343773	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTATAC	1130	0.0	64.108215	1
AGGGGGG	1395	0.0	57.94281	70
ATCGTAT	105	0.0	56.66063	39
GTATGCC	2100	0.0	55.04737	42
CGTATGC	2180	0.0	54.947952	41
TATGCCG	2120	0.0	54.528057	43
TCGTATG	2235	0.0	54.334255	40
CCGTCTT	1980	0.0	54.144978	47
TCTCGTA	2195	0.0	54.048912	38
GCCGTCT	2025	0.0	53.97237	46
CTTGAAA	2165	0.0	53.857742	57
CTCGTAT	2155	0.0	53.752975	39
TGAAAAA	2320	0.0	53.72344	59
TTGAAAA	2220	0.0	53.3047	58
GCTTGAA	2205	0.0	52.72193	56
TCTGCTT	2080	0.0	52.70634	53
CCTTAGT	20	0.006943545	52.508915	49
TTGATAA	20	0.0069549363	52.487156	29
TTCGTTA	20	0.0069549363	52.487156	12
GACTAAG	20	0.0069549363	52.487156	26