SRR1779613_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779613_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	383802
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTATACACATCTCCGAGCCCACGAGACGTGATAGCATCTCGTATGCCGT	5859	1.5265683868244564	No Hit
CTTATACACATCTCCGAGCCCACGAGACGTGATAGCATCTCGTATGCCGT	4547	1.1847254573973038	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1911	0.49791298638360404	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGTGATAGCATCTCGTATGCCG	1702	0.4434578246074799	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGTGATAGCATCTCGTATGCC	473	0.1232406292828073	No Hit
ATCTTATACACATCTCCGAGCCCACGAGACGTGATAGCATCTCGTATGCC	395	0.10291765024674181	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGATACT	15	0.0022202607	70.02789	53
CGTCTTA	95	0.0	62.67288	48
ATTATAC	1230	0.0	56.62644	1
ATCGTAT	50	9.804353E-10	55.993122	39
AGGGGGG	1405	0.0	55.54478	70
TATGCCG	2070	0.0	54.63529	43
CGTATGC	2145	0.0	54.513447	41
GCCGTAT	90	0.0	54.48034	46
CCGTCTT	1905	0.0	54.419056	47
TCGTATG	2220	0.0	54.22757	40
CTTGAAA	2115	0.0	53.62441	57
GTATGCC	2110	0.0	53.59955	42
CGTCTTC	1920	0.0	53.44668	48
TGCCGTA	105	0.0	53.368496	45
TCTCGTA	2270	0.0	53.341465	38
CTCGTAT	2205	0.0	53.326786	39
ATGCCGT	2140	0.0	52.848152	44
GACGTAT	20	0.006930435	52.53462	46
ATCTCGT	2325	0.0	52.07962	37
TCTTCTG	1965	0.0	52.01734	50