SRR1779612_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779612_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	474516
Sequences flagged as poor quality	0
Sequence length	76
%GC	62

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	22345	4.709008758398031	No Hit
CTTATACACATCTGACGCTGCCGACGAAGAGGATAGTGTAGATCTCGGTG	1648	0.34730125011590757	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATCATT	315	0.0	44.444443	58
TAGATCT	360	0.0	42.777775	39
CGTATCA	330	0.0	42.424244	56
TCATTAA	340	0.0	42.205883	60
GTATCAT	330	0.0	41.36364	57
GCCGTAT	350	0.0	40.0	54
CCGTATC	355	0.0	38.450706	55
CATTAAA	365	0.0	38.356163	61
ATCATTA	385	0.0	38.181816	59
GTAGACT	50	1.7089731E-4	35.0	4
ATTAAAA	430	0.0	33.372093	62
GTAGATC	465	0.0	32.365593	38
TAGTGTA	455	0.0	32.307693	34
TCTCGGT	485	0.0	31.752577	43
TGTAGAT	470	0.0	31.276596	37
TATAGTG	45	0.0043059373	31.111109	5
TAGATAA	45	0.0043059373	31.111109	5
AGATCTC	495	0.0	30.40404	40
TTAAAAA	515	0.0	29.902914	63
GTGTAGA	495	0.0	29.696968	36