SRR1779610_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779610_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	406025
Sequences flagged as poor quality	0
Sequence length	76
%GC	63

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	25011	6.1599655193645715	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGCTTA	20	0.0069492017	52.49926	47
TGAATAC	20	0.0069492017	52.49926	3
TGGTATG	35	2.0852423E-5	49.999294	18
TGTTACA	40	4.586576E-5	43.754772	35
CGTGTTA	40	4.586576E-5	43.754772	33
CTTGGTA	40	4.5899124E-5	43.749382	16
GTCCTAT	35	0.0012548966	39.999435	1
GAAACTA	35	0.0012548966	39.999435	63
GTGTTAC	45	9.185482E-5	38.89313	34
GGTATGT	45	9.1921494E-5	38.88834	19
TTACACC	45	9.1921494E-5	38.88834	4
CGTATCA	160	0.0	34.999508	56
GTGCTTT	50	1.7086802E-4	34.999508	24
ATCATTA	140	0.0	34.999508	59
CCGTATC	165	0.0	31.817736	55
TACCCTC	55	2.9903176E-4	31.817734	5
TTTACAC	55	2.9903176E-4	31.817734	3
CTAAAGG	55	2.9903176E-4	31.817734	26
TAGACAG	45	0.0043055085	31.110674	5
TTAGAGC	45	0.0043055085	31.110674	4