SRR1779605_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779605_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	209871
Sequences flagged as poor quality	0
Sequence length	76
%GC	60

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCCGT	15736	7.4979392102767894	No Hit
TCTTATACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCCG	2235	1.0649398916477264	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCC	1163	0.5541499301952152	No Hit
CTAATACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCCGT	1045	0.4979249157815992	No Hit
CTTAAACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCCGT	668	0.31829075956182606	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	628	0.2992314326419563	No Hit
TCATATACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCCG	297	0.14151550238003346	No Hit
TCTTTATACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCC	268	0.12769749036312783	No Hit
ATACACATCTCCGAGCCCACGAGACATAAGTTAATCTCGTATGCCGTCTT	257	0.12245617546016363	RNA PCR Primer, Index 15 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTCTAT	15	0.0022235345	69.99071	1
GATAAAC	20	7.918751E-5	69.99071	33
TATCTTC	15	0.0022235345	69.99071	16
AGGGGGG	1785	0.0	65.28545	70
AGTTAAA	55	0.0	63.627922	32
GTATGAC	150	0.0	63.036694	42
GTTAAAC	45	3.8380676E-10	62.213955	33
TTATGCT	40	1.0586518E-8	61.271065	52
TAGTATG	35	2.962006E-7	60.006332	40
CTTTACA	35	2.966899E-7	59.99204	1
GTCTTAT	65	0.0	59.251144	49
TGCTAGA	95	0.0	58.953594	55
CGTCTTA	60	1.8189894E-12	58.36731	48
CTAAAAC	120	0.0	58.32559	1
TTTATAC	30	8.362922E-6	58.32559	3
CGTATGA	165	0.0	57.292427	41
GCTAGAA	110	0.0	57.278774	56
GTAAATC	55	3.6379788E-11	57.26513	33
AGATAAA	25	2.3880863E-4	55.99257	32
TTAAACT	50	9.767973E-10	55.99257	34