SRR1779601_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779601_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	206459
Sequences flagged as poor quality	0
Sequence length	76
%GC	62

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGTGATAGCATCTCGTATGCCGT	11657	5.646157348432376	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGTGATAGCATCTCGTATGCCG	1732	0.8389074828416295	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGTGATAGCATCTCGTATGCC	1287	0.6233683201022964	No Hit
CTAATACACATCTCCGAGCCCACGAGACGTGATAGCATCTCGTATGCCGT	660	0.3196760615909212	No Hit
CTTAAACACATCTCCGAGCCCACGAGACGTGATAGCATCTCGTATGCCGT	482	0.2334603964951879	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	417	0.20197714800517294	No Hit
CTTATACACATCTCCGAGCCCACGAGACGTGATAGCATCTCGTATGACGT	217	0.10510561418974228	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTAATAC	15	0.0022235634	69.99007	2
TTTATAC	30	1.0211261E-7	69.99007	3
CACACTC	15	0.0022235634	69.99007	5
TATCGGA	15	0.0022235634	69.99007	64
ATAGCAA	50	1.4551915E-11	62.99107	32
TAGCAAC	45	3.8380676E-10	62.2134	33
AGGGGGG	1165	0.0	61.579247	70
TATACAA	25	2.3881023E-4	55.99206	3
CTTTTAC	20	0.0069345944	52.51799	52
TCTACTG	40	7.4365744E-7	52.51799	50
TCTTTTA	20	0.0069345944	52.51799	51
CTTAATA	20	0.006947898	52.492554	1
ACCATTC	20	0.006947898	52.492554	21
TAGAAAC	20	0.006947898	52.492554	33
ATAGAAA	20	0.006947898	52.492554	32
TTATCTG	20	0.006947898	52.492554	19
CATTCCC	20	0.006947898	52.492554	23
CTAAAAC	40	7.4614945E-7	52.492554	1
CTCGTAT	2285	0.0	50.55212	39
TCTCGTA	2315	0.0	50.501827	38