SRR1779598_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779598_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	182904
Sequences flagged as poor quality	0
Sequence length	76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	18422	10.071950312732362	No Hit
CTTATACACATCTGACGCTGCCGACGAGCGATCTAGTGTAGATCTCGGTG	1319	0.7211433320211695	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	222	0.12137514761842277	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CACGAGT	25	2.3860292E-4	55.998466	65
TAGAGCG	30	5.867165E-4	46.66539	27
GGGATCC	35	0.0012514867	40.009846	4
ATCTCGG	250	0.0	37.798965	42
ATCATTA	250	0.0	37.798965	59
TCGGTGG	280	0.0	37.498974	45
CGTATCA	245	0.0	37.14184	56
GTATCAT	265	0.0	36.98012	57
GCCGTAT	235	0.0	35.743706	54
TCTCGGT	245	0.0	35.71331	43
TAGATCT	285	0.0	35.61306	39
TCATTAA	280	0.0	34.999043	60
CCGTATC	240	0.0	34.999043	55
CGGTGGT	280	0.0	34.999043	46
TGTAGAT	300	0.0	34.999043	37
CGCCGTA	250	0.0	34.999043	53
AGATCTC	275	0.0	34.362698	40
CATTAAA	300	0.0	33.83241	61
GTAGATC	300	0.0	33.83241	38
CTCGGTG	275	0.0	33.090004	44