SRR1779597_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779597_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	42467
Sequences flagged as poor quality	0
Sequence length	76
%GC	70

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	7679	18.082275649327713	No Hit
CTTATACACATCTGACGCTGCCGACGAGCGATCTAGTGTAGATCTCGGTG	587	1.3822497468622696	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	114	0.2684437327807474	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	53	0.12480278804718958	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	46	0.10831940094661738	No Hit
ATACACATCTGACGCTGCCGACGAGCGATCTAGTGTAGATCTCGGTGGTC	45	0.10596463136082135	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTACTAA	15	0.0022101332	70.0	10
ATCAGAA	15	0.0022101332	70.0	12
ACTAAAA	15	0.0022101332	70.0	12
CGTCTGG	20	0.006906234	52.500004	9
CTAAAAA	20	0.006906234	52.500004	13
TACTAAA	20	0.006906234	52.500004	11
TCTGGCG	40	7.313465E-7	52.500004	11
TCTCGGT	80	0.0	48.125004	43
GTCTGGC	30	5.8153004E-4	46.666664	10
ATCTCGG	85	1.8189894E-12	45.294117	42
TAGATCT	85	1.8189894E-12	45.294117	39
TGTAGAT	85	1.8189894E-12	45.294117	37
TATCATT	70	3.6561687E-10	45.0	58
CATTAAA	80	2.7284841E-11	43.750004	61
CCGTATC	80	2.7284841E-11	43.750004	55
TCGGTGG	105	0.0	43.333336	45
AGATCTC	90	1.8189894E-12	42.777775	40
GTAGATC	90	1.8189894E-12	42.777775	38
GTGTAGA	90	1.8189894E-12	42.777775	36
GATCTCG	90	1.8189894E-12	42.777775	41