SRR1779597_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779597_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	42467
Sequences flagged as poor quality	0
Sequence length	76
%GC	60

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTATACACATCTCCGAGCCCACGAGACGAGCACGTATCTCGTATGCCGT	3682	8.670261614900982	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1052	2.4772176042574237	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGAGCACGTATCTCGTATGCCG	439	1.033743848164457	No Hit
CTTATACACATCTCCGAGCCCACGAGACGAGCACGTATCTCGTATGCCGT	319	0.7511714978689336	No Hit
ATCTTATACACATCTCCGAGCCCACGAGACGAGCACGTATCTCGTATGCC	211	0.4968563826029623	No Hit
ATTATACACATCTCCGAGCCCACGAGACGAGCACGTATCTCGTATGACGT	194	0.4568252996444298	No Hit
ATTATACACATCTCCGAGCCCACGAGACGAGCACGTATCTCGTATGCAGT	134	0.31553912449666804	No Hit
ATACACATCTCCGAGCCCACGAGACGAGCACGTATCTCGTATGCCGTCTT	108	0.2543151152659712	TruSeq Adapter, Index 2 (95% over 21bp)
TCTTTATACACATCTCCGAGCCCACGAGACGAGCACGTATCTCGTATGCC	85	0.20015541479266255	No Hit
ATTATACACATCTCCGAGCCCACGAGACGAGCACGTATCTCGTATGCCGA	70	0.1648338710057221	No Hit
ATTATACACATCTCCGAGCCCACGAGACGAGCACGAATCTCGTATGCCGT	60	0.1412861751477618	No Hit
ATTATACACATCTCCGAGCCCACGAGACGCGCACGTATCTCGTATGCCGT	55	0.12951232721878164	No Hit
ATTATACACATCTCCGCGCCCACGAGACGAGCACGTATCTCGTATGCCGT	53	0.12480278804718958	No Hit
ATTATACACATCTCCGAGCCCACGAGACGAGAACGTATCTCGTATGCCGT	47	0.11067417053241341	No Hit
ATTATACACATCTCCGAGCCAACGAGACGAGCACGTATCTCGTATGCCGT	46	0.10831940094661738	No Hit
ATTTACACATCTCCGAGCCCACGAGACGAGCACGTATCTCGTATGCCGTC	44	0.10360986177502532	No Hit
ATATACACATCTCCGAGCCCACGAGACGAGCACGTATCTCGTATGCCGTC	43	0.10125509218922929	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAATGAC	20	7.7999335E-5	70.074295	42
AATGACG	20	7.7999335E-5	70.074295	43
ACGTCTA	20	7.7999335E-5	70.074295	47
GAAAGCC	15	0.0022008368	70.07429	42
AAGTATC	20	7.845702E-5	69.99175	33
AGTATCT	20	7.845702E-5	69.99175	34
CCGTATC	25	2.7960687E-6	69.99175	33
CCCGTAT	25	2.7960687E-6	69.99175	32
TCTAATG	15	0.0022111656	69.99175	50
ATCTTAT	50	0.0	69.99175	1
GTATCTA	15	0.0022111656	69.99175	35
ACCACCC	15	0.0022111656	69.99175	35
ATCTGCA	20	7.845702E-5	69.99175	52
ATTATAC	575	0.0	65.731384	1
ACGAATC	50	1.2732926E-11	62.99258	33
GAATCTC	45	3.7107384E-10	62.214893	35
CGAATCT	45	3.7107384E-10	62.214893	34
CTACTGC	40	1.0355507E-8	61.242786	51
AATCTCG	40	1.0355507E-8	61.242786	36
GACGTCT	75	0.0	60.731056	46