SRR1779596_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779596_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	210252
Sequences flagged as poor quality	0
Sequence length	76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTATACACATCTCCGAGCCCACGAGACAATGGTAGATCTCGTATGCCGT	4251	2.021859482906227	No Hit
CTTATACACATCTCCGAGCCCACGAGACAATGGTAGATCTCGTATGCCGT	1144	0.544108973993113	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1033	0.49131518368434074	No Hit
TCTTATACACATCTCCGAGCCCACGAGACAATGGTAGATCTCGTATGCCG	649	0.3086772063999391	No Hit
ATCTTATACACATCTCCGAGCCCACGAGACAATGGTAGATCTCGTATGCC	274	0.1303198067081407	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGTAT	15	0.0022237776	69.98882	22
ATCTAGT	15	0.0022237776	69.98882	37
ATTATAC	780	0.0	58.772663	1
GTATGCC	975	0.0	54.95351	42
CGTATGC	1020	0.0	54.57607	41
AGTCTTC	45	2.6726411E-8	54.48758	48
CCGTCTT	925	0.0	54.15098	47
GCCGTCT	970	0.0	53.444374	46
GTCTTCT	990	0.0	53.388012	49
TCGTATG	1090	0.0	53.294243	40
CTTGAAA	1060	0.0	53.17718	57
TATGCCG	1015	0.0	53.132874	43
TCTTCTG	970	0.0	52.68453	50
ACACAGT	20	0.006948564	52.49162	6
ACGGGTA	20	0.006948564	52.49162	21
CTCGTAT	1060	0.0	52.491615	39
TTGAAAA	1095	0.0	52.116924	58
AGGGGGG	485	0.0	51.950466	70
TCTCGTA	1065	0.0	51.91659	38
CGTCTTC	1015	0.0	51.765118	48