SRR1779595_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779595_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	92557
Sequences flagged as poor quality	0
Sequence length	76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCCGT	5627	6.079496958630898	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1494	1.61414047559882	No Hit
CTTATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCCGT	663	0.7163153516211632	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCCG	615	0.6644554166621649	No Hit
ATCTTATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCC	389	0.4202815562302149	No Hit
ATTATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGACGT	223	0.24093261449701264	No Hit
ATTATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCAGT	162	0.17502728048661906	No Hit
ATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCCGTCTT	107	0.11560443834610025	Illumina PCR Primer Index 9 (95% over 22bp)
TCTTTATACACATCTCCGAGCCCACGAGACGTTAACAGATCTCGTATGCC	100	0.10804153116457965	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGCCGT	20	7.8239755E-5	70.11911	44
CGAATGC	20	7.8239755E-5	70.11911	41
GAGTGTA	20	7.887184E-5	70.0054	38
TCGAAAG	15	0.0022177459	70.0054	40
GTCTCCA	15	0.0022225077	69.96758	1
TAGCACG	15	0.0022225077	69.96758	61
CCGAACC	15	0.0022225077	69.96758	33
GCAGCTA	15	0.0022225077	69.96758	69
AGTAGTG	15	0.0022225077	69.96758	5
GTAACGG	15	0.0022225077	69.96758	25
ATTATAC	905	0.0	64.55573	1
ATCGTAT	60	1.8189894E-12	58.337833	39
TCTAGCA	25	2.3786136E-4	56.004326	59
CAAGAAA	25	2.3786136E-4	56.004326	57
ATATCGT	50	9.695214E-10	55.974068	37
AGGGGGG	520	0.0	55.83952	70
TATGCAG	45	2.6318958E-8	54.53709	43
CCGTCTT	1015	0.0	53.539227	47
CGTCTTA	20	0.006885463	52.589333	48
AATGCCG	20	0.006885463	52.589333	43