SRR1779592_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779592_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	351708
Sequences flagged as poor quality	0
Sequence length	76
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTATACACATCTCCGAGCCCACGAGACTTGCTAAGATCTCGTATGCCGT	8337	2.370432290422737	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTGCTAAGATCTCGTATGCCGT	2765	0.7861635220125787	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1934	0.5498879752521979	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTTGCTAAGATCTCGTATGCCG	1232	0.35029058196003504	No Hit
ATCTTATACACATCTCCGAGCCCACGAGACTTGCTAAGATCTCGTATGCC	667	0.18964595630466183	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATTATAC	1475	63.336372	1
AGGGGGG	1120	56.232635	70
CCGTCTT	2085	51.102604	47
GCCGTCT	2085	51.102604	46
TCGTATG	2245	50.978714	40
GTCTTCT	2085	50.905502	49
CGTATGC	2215	50.893597	41
TATGCCG	2180	50.78326	43
GTATGCC	2165	50.649647	42
CTTGAAA	2175	50.5275	57
CTCGTAT	2245	50.503838	39
TTCTGCT	2065	50.041477	52
TGAAAAA	2385	49.600464	59
TCTTCTG	2135	49.549267	50
TCTCGTA	2335	49.45643	38
CGTCTTC	2190	49.292645	48
GCTTGAA	2205	49.219147	56
TAAGATC	2325	49.21061	33
TCTGCTT	2140	48.9494	53
TTGAAAA	2290	48.601433	58