SRR1779591_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779591_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	160434
Sequences flagged as poor quality	0
Sequence length	76
%GC	67

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	18292	11.401573232606555	No Hit
CTTATACACATCTGACGCTGCCGACGAGCGATCTAGTGTAGATCTCGGTG	1023	0.637645386888066	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	220	0.13712804019098196	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTATGG	25	2.3851857E-4	55.998253	2
GTCCTAT	25	2.3851857E-4	55.998253	1
TTCCATC	25	2.3851857E-4	55.998253	25
CAATAAA	20	0.00693349	52.514732	61
AAAAGCC	20	0.0069420473	52.498363	30
AATTGGA	20	0.0069420473	52.498363	33
AAAAAGG	115	0.0	45.650753	70
CGTATCA	170	0.0	45.2927	56
TCATTAA	160	0.0	43.762276	60
TAGATCT	200	0.0	43.748634	39
ATCATTA	165	0.0	42.43615	59
CATTAAA	175	0.0	42.011784	61
GTAGATC	215	0.0	40.696407	38
GCCGTAT	190	0.0	40.525055	54
TATCATT	165	0.0	40.314342	58
GTATCAT	175	0.0	40.011223	57
CCGTATC	195	0.0	39.48595	55
TGTAGAT	215	0.0	39.06855	37
ATTAAAA	190	0.0	38.69507	62
TAGTGTA	220	0.0	38.18063	34