SRR1779591_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779591_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	160434
Sequences flagged as poor quality	0
Sequence length	76
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTATGCCGT	6660	4.151239762145181	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1959	1.2210628669733348	No Hit
CTTATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTATGCCGT	1754	1.0932844658862835	No Hit
TCTTATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTATGCCG	930	0.5796776244436964	No Hit
ATTATACACATCTCCGAGCCCACGAGACATTGCCGGATCTAGTATGCCGT	510	0.31788772953364	No Hit
ATTATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTATGACGT	496	0.30916139970330475	No Hit
ATCTTATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTATGCC	455	0.2836057194858945	No Hit
ATTATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTAAGCCGT	225	0.14024458655895883	No Hit
ATTATACACATCTCCGAGCCCACGAGACATTGCCGGATCTCGTATGCCGA	182	0.1134422877943578	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATAA	15	0.002216856	70.03619	48
CGTATGG	20	7.8998404E-5	70.01434	41
GTATTAT	15	0.0022196008	70.01434	49
CCTAAGC	20	7.8998404E-5	70.01434	41
GTAAGAC	30	1.01723344E-7	70.01434	42
TAAGACG	35	3.6798156E-9	70.01434	43
GCTTTAA	30	1.01723344E-7	70.01434	56
ATGGGTT	15	0.0022223482	69.99252	7
ATCGTAA	15	0.0022223482	69.99252	39
ATTATAC	1320	0.0	68.13666	1
GTATTCT	55	0.0	63.649403	49
TAGTATG	220	0.0	63.629562	40
TCTAGTA	245	0.0	62.850426	38
AGTATGC	185	0.0	62.44522	41
ATCTAGT	250	0.0	61.593414	37
CGTAAGC	80	0.0	61.262554	41
CTAGTAA	40	1.0602889E-8	61.243454	39
TTTAAAA	35	2.9555304E-7	60.012295	58
CTTTAAA	35	2.9555304E-7	60.012295	57
AATAAGC	35	2.9555304E-7	60.012295	51