##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548184_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2223311 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.126109662570823 31.0 31.0 33.0 30.0 34.0 2 31.509934507588007 31.0 31.0 34.0 30.0 34.0 3 31.536221878090828 31.0 31.0 34.0 30.0 34.0 4 35.38314252931776 37.0 35.0 37.0 33.0 37.0 5 35.25386641814843 37.0 35.0 37.0 33.0 37.0 6 35.30430740458712 37.0 35.0 37.0 32.0 37.0 7 35.783744604331105 37.0 35.0 37.0 35.0 37.0 8 35.79469314009601 37.0 35.0 37.0 35.0 37.0 9 37.527162416773905 39.0 37.0 39.0 35.0 39.0 10 36.80561109084604 39.0 37.0 39.0 32.0 39.0 11 36.46687170620754 39.0 35.0 39.0 32.0 39.0 12 36.13092905131131 38.0 35.0 39.0 31.0 39.0 13 35.98995012393678 38.0 35.0 39.0 31.0 39.0 14 36.984433576769064 39.0 35.0 41.0 31.0 41.0 15 37.16597722945643 39.0 35.0 41.0 32.0 41.0 16 37.21809724325567 39.0 35.0 41.0 32.0 41.0 17 37.071433551131626 39.0 35.0 41.0 31.0 41.0 18 36.95073518729499 39.0 35.0 40.0 31.0 41.0 19 36.85159341180788 38.0 35.0 40.0 31.0 41.0 20 36.709117617823146 38.0 35.0 40.0 31.0 41.0 21 36.585228067508325 38.0 35.0 40.0 31.0 41.0 22 36.51109583859388 38.0 35.0 40.0 31.0 41.0 23 36.43694876695163 38.0 35.0 40.0 30.0 41.0 24 36.27171817168178 38.0 35.0 40.0 30.0 41.0 25 36.15391324020796 38.0 35.0 40.0 30.0 41.0 26 36.090044982460846 38.0 35.0 40.0 30.0 41.0 27 36.063799891243285 38.0 35.0 40.0 30.0 41.0 28 36.06802062329562 38.0 35.0 40.0 30.0 41.0 29 36.073140914608885 38.0 35.0 40.0 30.0 41.0 30 35.97637487512993 38.0 35.0 40.0 30.0 41.0 31 35.82843560797387 38.0 34.0 40.0 29.0 41.0 32 35.638606114933985 38.0 34.0 40.0 29.0 41.0 33 35.45740564410467 38.0 34.0 40.0 27.0 41.0 34 35.21834552161169 38.0 34.0 40.0 26.0 41.0 35 34.99851392810093 38.0 34.0 40.0 25.0 41.0 36 34.82735208884407 38.0 34.0 40.0 24.0 41.0 37 34.73743889181495 38.0 34.0 40.0 24.0 41.0 38 34.63868212769154 38.0 33.0 40.0 23.0 41.0 39 34.60131983334765 38.0 33.0 40.0 23.0 41.0 40 34.49107614724166 38.0 33.0 40.0 23.0 41.0 41 34.42309960234983 37.0 33.0 40.0 23.0 41.0 42 34.38253622637589 37.0 33.0 40.0 23.0 41.0 43 34.28090671975266 37.0 33.0 40.0 23.0 41.0 44 34.134897906770576 37.0 33.0 40.0 22.0 41.0 45 34.04612085308803 37.0 33.0 40.0 23.0 41.0 46 33.93162180189816 37.0 33.0 40.0 22.0 41.0 47 33.90143619133806 37.0 33.0 40.0 22.0 41.0 48 33.77484031698669 37.0 33.0 40.0 22.0 41.0 49 33.65073397288998 36.0 32.0 40.0 20.0 41.0 50 33.534180778127755 36.0 32.0 40.0 20.0 41.0 51 33.21469331101227 36.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 0.0 11 1.0 12 10.0 13 8.0 14 33.0 15 76.0 16 219.0 17 549.0 18 1237.0 19 2424.0 20 4169.0 21 6877.0 22 10105.0 23 14791.0 24 21644.0 25 30911.0 26 41858.0 27 49161.0 28 52582.0 29 56972.0 30 65561.0 31 78469.0 32 94482.0 33 117731.0 34 170702.0 35 216055.0 36 181455.0 37 222611.0 38 318476.0 39 464063.0 40 76.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.78822530900985 23.99623804317075 28.85264364724503 16.36289300057437 2 32.42137514724661 25.620527222687244 29.33300829258705 12.625089337479103 3 27.079522388005994 25.314272272300187 34.53210099711646 13.074104342577353 4 24.376256852954896 27.492869868407972 33.89121000165969 14.239663276977446 5 22.63300096117907 31.437122381888994 32.518527547428135 13.411349109503798 6 21.007632310549447 39.807206459195314 29.107443807906314 10.07771742234892 7 86.92207253056365 2.8848865498349086 8.865831186010414 1.3272097335910271 8 87.94860458118545 2.0592710601440825 8.461704188033073 1.5304201706373963 9 83.1119443028888 5.096542948782244 9.723740853168989 2.0677718951599666 10 37.8296153799446 39.02872787477775 14.502649426913283 8.639007318364367 11 27.610532219738936 23.6515269343785 32.11691931538143 16.62102153050113 12 28.361889092439156 22.571920887361237 31.680588095862433 17.38560192433717 13 22.702042134456224 27.272207981699363 32.37234916752537 17.65340071631904 14 17.366171444300864 31.44652277616582 32.945008593039844 18.242297186493477 15 17.023259454030498 27.736965273864072 39.470321515973254 15.769453756132181 16 21.082610574948806 25.40485788987685 37.63049793753551 15.882033597638836 17 20.86910018436467 24.83017445602527 32.46468892566087 21.836036433949186 18 21.35207355156341 26.092166143198142 34.18442134276311 18.371338962475335 19 24.027812573229745 27.684700880803447 30.739379241140803 17.548107304826 20 25.569162388887563 27.85354815408191 30.33439766186557 16.242891795164958 21 23.641721738434253 26.647778920717798 32.383458724397975 17.32704061644997 22 22.162261599929113 23.973794039610294 33.06127662751635 20.802667732944244 23 19.24260708465887 28.04870753574286 32.530626619487784 20.178058760110485 24 19.84994451968258 26.64247152107825 35.783882686677664 17.72370127256151 25 20.059361915629438 28.622806256074835 32.39686215738599 18.920969670909738 26 18.915932139048472 31.73411187188837 30.612136583680826 18.737819405382332 27 18.362748171533358 30.68599039900401 33.07553464180225 17.875726787660387 28 17.274056575980598 29.412664265143295 35.354927853098374 17.958351305777732 29 18.269508854136916 27.274771725593045 35.27288804850064 19.182831371769403 30 20.045598658937053 27.693831407301992 33.80215363482662 18.45841629893434 31 22.78920942684132 27.658928507977514 31.31001465831816 18.241847406863005 32 23.573355234602804 27.85228877111659 30.951990072463996 17.62236592181661 33 22.459970737337244 28.01115093659861 30.669663398417946 18.8592149276462 34 19.41730149313344 29.292483147881693 31.963139659723716 19.327075699261147 35 19.3428179863276 28.49929676954776 31.967097720471855 20.190787523652787 36 22.237644665995894 29.694676093448013 29.540806481864212 18.52687275869188 37 20.22164240630303 30.59657420846656 30.63543516853918 18.546348216691232 38 19.90234384663234 30.907821712751836 28.85790606892153 20.33192837169429 39 19.308904602190157 29.865727286915778 29.992610120671376 20.832757990222692 40 21.18264156476534 28.361754158550017 29.978666952126805 20.476937324557834 41 18.41181912921764 28.15944328076459 30.725076248891853 22.703661341125915 42 20.597073463856383 28.496822981580173 29.372903745809744 21.5331998087537 43 20.711812247589293 28.417976612358775 29.73020868425515 21.140002455796782 44 19.79875959773509 30.173826333787762 29.811169017739758 20.216245050737392 45 19.210537797006356 31.090252330870488 29.087518570276494 20.611691301846662 46 20.611331478142283 30.399030994764114 29.13384587221491 19.855791654878693 47 20.203426331268997 29.31857036644896 29.85511248763668 20.622890814645363 48 20.397956021447293 28.022035603655986 30.978212224920398 20.60179614997632 49 20.03075593113154 27.636664416269248 31.275336648808917 21.057243003790294 50 18.68321615824327 30.446662657630895 30.368715847670437 20.501405336455402 51 18.92033997942708 29.643940951130993 30.056029048567655 21.37969002087427 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1216.0 1 2003.5 2 2791.0 3 21428.5 4 40066.0 5 27801.0 6 15536.0 7 15370.0 8 15204.0 9 15920.5 10 16637.0 11 17146.5 12 17656.0 13 17584.0 14 17512.0 15 16902.0 16 16292.0 17 15428.0 18 14564.0 19 14066.0 20 13568.0 21 14452.5 22 15337.0 23 16631.0 24 17925.0 25 20437.0 26 27269.5 27 31590.0 28 37273.0 29 42956.0 30 50487.5 31 58019.0 32 65171.0 33 72323.0 34 80230.0 35 88137.0 36 94143.0 37 100149.0 38 107756.0 39 115363.0 40 127451.5 41 139540.0 42 154141.5 43 168743.0 44 171552.0 45 174361.0 46 178275.0 47 182189.0 48 176563.5 49 170938.0 50 161861.0 51 152784.0 52 136716.5 53 120649.0 54 106540.0 55 92431.0 56 86566.5 57 80702.0 58 73126.0 59 65550.0 60 59073.0 61 52596.0 62 44068.0 63 35540.0 64 28721.5 65 21903.0 66 16975.5 67 12048.0 68 9575.5 69 7103.0 70 5728.5 71 4354.0 72 3612.0 73 2870.0 74 2192.0 75 1231.5 76 949.0 77 687.5 78 426.0 79 319.0 80 212.0 81 131.5 82 51.0 83 44.0 84 37.0 85 26.5 86 16.0 87 12.0 88 8.0 89 6.0 90 4.0 91 2.0 92 0.0 93 1.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2223311.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.41983315863395 #Duplication Level Percentage of deduplicated Percentage of total 1 79.67035041341866 19.45536664785587 2 6.68097055801988 3.2629637272918206 3 2.426948664958447 1.7779704444856401 4 1.3712850532856515 1.3394620885665631 5 0.8749732069612912 1.0683349866134813 6 0.6203309087885528 0.908902637745614 7 0.5178181819002194 0.8851523525957368 8 0.42989872300039517 0.8398444072623553 9 0.3662214826402474 0.8048760754664162 >10 5.278030777553015 31.24078851122168 >50 1.2971323103640078 22.016220122759783 >100 0.4632568485899027 14.743728381571403 >500 0.002411821117203373 0.3858611734983386 >1k 1.855247013233364E-4 0.0830890445222441 >5k 0.0 0.0 >10k+ 1.855247013233364E-4 1.187439398543085 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26210 1.1788724114620042 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03539765691799303 0.0 2 0.0 0.0 0.0 0.11082570094782061 0.0 3 0.0 0.0 0.0 0.18733321609077633 0.0 4 0.0 0.0 0.0 0.29662966629499876 0.0 5 0.0 0.0 0.0 0.508700762061628 0.0 6 0.0 0.0 0.0 0.9185849393089855 0.0 7 0.0 0.0 0.0 1.150761184557626 0.0 8 0.0 0.0 0.0 1.6398965326938066 0.0 9 0.0 0.0 0.0 1.8771103098037116 0.0 10 0.0 0.0 0.0 2.1848495329713207 0.0 11 0.0 0.0 0.0 2.4884507835386054 0.0 12 0.0 0.0 0.0 2.730432224731493 0.0 13 0.0 0.0 0.0 2.8583945296002224 0.0 14 0.0 0.0 0.0 2.9290549095470673 0.0 15 0.0 0.0 0.0 2.99764630319375 0.0 16 0.0 0.0 0.0 3.1169728391574547 0.0 17 0.0 0.0 0.0 3.2722367675957167 0.0 18 0.0 0.0 0.0 3.4578608210907067 0.0 19 0.0 0.0 0.0 3.575298282606437 0.0 20 0.0 0.0 0.0 3.698897725059607 0.0 21 0.0 0.0 0.0 3.842512361068694 0.0 22 0.0 0.0 0.0 4.019185799917331 0.0 23 0.0 0.0 0.0 4.207058751564671 0.0 24 0.0 0.0 0.0 4.3493690266453955 0.0 25 0.0 0.0 0.0 4.474947499472633 0.0 26 0.0 0.0 0.0 4.59409412358415 0.0 27 0.0 0.0 0.0 4.721426736970222 0.0 28 0.0 0.0 0.0 4.8569453396308475 0.0 29 0.0 0.0 0.0 5.009105788618866 0.0 30 0.0 0.0 0.0 5.185779227467502 0.0 31 0.0 0.0 0.0 5.345046194616947 0.0 32 0.0 0.0 0.0 5.503953338062017 0.0 33 0.0 0.0 0.0 5.658857442795902 0.0 34 0.0 0.0 0.0 5.827794672000453 0.0 35 0.0 0.0 0.0 6.011889474751845 0.0 36 0.0 0.0 0.0 6.1906318999006436 0.0 37 0.0 0.0 0.0 6.37135335542351 0.0 38 0.0 0.0 0.0 6.571505290982683 0.0 39 0.0 0.0 0.0 6.839214127038457 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACCGC 25 3.8919858E-5 45.0 20 CGTTTTT 13940 0.0 43.450504 1 TACGGGA 1145 0.0 41.46288 4 CGTTAGG 350 0.0 40.5 2 GTTAGCG 135 0.0 40.000004 1 ACGGGAT 1355 0.0 39.520298 5 ACGGGAC 965 0.0 39.404144 5 TGTCGCG 40 3.4601726E-7 39.375 1 TATAGCG 115 0.0 39.130436 1 CGGGATA 560 0.0 38.973213 6 AGGGATC 3095 0.0 38.67528 6 TTGCGAG 280 0.0 38.571426 1 TAGGGAC 2710 0.0 38.523987 5 CACGGGA 850 0.0 38.117645 4 TATCGCG 65 9.094947E-12 38.07692 1 TAGGGAT 4810 0.0 38.030148 5 CTCACGA 160 0.0 37.96875 24 CGAGGGA 1790 0.0 37.960896 4 TAAGGGA 3420 0.0 37.960526 4 ATAGGGA 3790 0.0 37.816624 4 >>END_MODULE