##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548182_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2023172 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.09026667035724 31.0 31.0 33.0 30.0 34.0 2 31.458489935606067 31.0 31.0 34.0 30.0 34.0 3 31.52957632865619 31.0 31.0 34.0 30.0 34.0 4 35.36369522709883 37.0 35.0 37.0 33.0 37.0 5 35.21840209334649 37.0 35.0 37.0 32.0 37.0 6 35.268987016427666 37.0 35.0 37.0 32.0 37.0 7 35.73091165753579 37.0 35.0 37.0 35.0 37.0 8 35.72436896121536 37.0 35.0 37.0 35.0 37.0 9 37.44585136607268 39.0 37.0 39.0 35.0 39.0 10 36.6960149705512 39.0 37.0 39.0 32.0 39.0 11 36.42391897475845 38.0 35.0 39.0 32.0 39.0 12 35.88125181645456 37.0 35.0 39.0 31.0 39.0 13 35.661351086313964 37.0 35.0 39.0 30.0 39.0 14 36.58415102621033 38.0 35.0 41.0 31.0 41.0 15 36.83628480425787 38.0 35.0 41.0 31.0 41.0 16 36.931513979038854 38.0 35.0 41.0 31.0 41.0 17 36.79102715933198 38.0 35.0 41.0 31.0 41.0 18 36.72465069702427 38.0 35.0 40.0 31.0 41.0 19 36.637134163580754 38.0 35.0 40.0 31.0 41.0 20 36.476467645855124 38.0 35.0 40.0 31.0 41.0 21 36.33037477782413 38.0 35.0 40.0 30.0 41.0 22 36.25655307606076 38.0 35.0 40.0 30.0 41.0 23 36.194393753966544 38.0 34.0 40.0 30.0 41.0 24 36.01998693141265 38.0 34.0 40.0 30.0 41.0 25 35.90918023776525 38.0 34.0 40.0 30.0 41.0 26 35.818323899302676 38.0 34.0 40.0 30.0 41.0 27 35.77882404461904 38.0 34.0 40.0 30.0 41.0 28 35.790846749559606 38.0 34.0 40.0 29.0 41.0 29 35.79139489870362 38.0 34.0 40.0 29.0 41.0 30 35.70817706057616 38.0 34.0 40.0 29.0 41.0 31 35.55989011314905 38.0 34.0 40.0 29.0 41.0 32 35.37946254693126 37.0 34.0 40.0 27.0 41.0 33 35.22828805459941 37.0 34.0 40.0 27.0 41.0 34 35.02894563586289 37.0 34.0 40.0 26.0 41.0 35 34.86365271959082 37.0 34.0 40.0 25.0 41.0 36 34.64506527373847 37.0 33.0 40.0 24.0 41.0 37 34.560013681486296 37.0 33.0 40.0 24.0 41.0 38 34.46898533589828 37.0 33.0 40.0 23.0 41.0 39 34.42657124554907 37.0 33.0 40.0 23.0 41.0 40 34.29258510892796 37.0 33.0 40.0 23.0 41.0 41 34.21084218247386 37.0 33.0 40.0 23.0 41.0 42 34.157352909194074 37.0 33.0 40.0 23.0 41.0 43 34.0641057705425 36.0 33.0 40.0 23.0 41.0 44 33.92724246875698 36.0 33.0 40.0 23.0 41.0 45 33.83680329700095 36.0 33.0 40.0 23.0 41.0 46 33.72408623685974 36.0 33.0 40.0 23.0 41.0 47 33.667301148888974 36.0 33.0 40.0 23.0 41.0 48 33.540157732511126 35.0 32.0 40.0 22.0 41.0 49 33.428189990766974 36.0 32.0 40.0 21.0 41.0 50 33.27628595097204 35.0 32.0 39.0 20.0 41.0 51 32.92420120484071 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 6.0 13 6.0 14 28.0 15 88.0 16 250.0 17 610.0 18 1308.0 19 2665.0 20 4448.0 21 6928.0 22 10585.0 23 15026.0 24 20564.0 25 28722.0 26 37754.0 27 43525.0 28 48028.0 29 53797.0 30 62706.0 31 74962.0 32 91684.0 33 114550.0 34 171278.0 35 221744.0 36 164469.0 37 197029.0 38 270227.0 39 380111.0 40 70.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.570170010261116 23.294312100009293 27.72240817883996 14.413109710889632 2 32.48369392221719 25.063365843339074 28.65480542435344 13.798134810090293 3 28.76285357844019 25.209917891311267 32.13928425264881 13.887944277599729 4 25.77877708865089 28.094546583286046 31.414284104366807 14.712392223696256 5 23.24345137239938 31.446609581390017 30.869891437801627 14.440047608408973 6 21.12692346473755 40.736427748110394 27.808461168897157 10.328187618254898 7 86.83750071669635 3.7553406235357154 7.769482772596695 1.637675887171234 8 87.33300974904753 3.361009345720482 7.380094228271249 1.9258866769607328 9 82.77793484686423 5.756060285531828 9.031758051218581 2.4342468163853592 10 40.488697945602254 33.0946652088898 15.345408101733318 11.071228743774627 11 34.74627960450224 24.327491681379538 25.5554643895823 15.370764324535926 12 32.17670074516651 23.28160927494054 27.919524390412683 16.622165589480282 13 22.446682733845662 32.579582951919065 28.37964345097698 16.59409086325829 14 17.32220493363886 34.776331424120144 30.73693190692635 17.164531735314643 15 16.985604782984343 27.427623553509044 39.37964740516377 16.20712425834284 16 19.902064678633355 25.38177673475117 38.00368925627678 16.712469330338696 17 20.097549788154442 25.05530918775072 29.50525214860625 25.34188887548859 18 21.85370299707588 27.03877870986748 32.41167829527099 18.695839997785654 19 25.815205034470623 27.843159157995462 27.654495020690284 18.687140786843628 20 26.90754913571362 27.478830272463238 28.132655058492308 17.480965533330828 21 23.19812650629803 28.736508808939625 30.459990549493565 17.605374135268775 22 23.139258550434665 24.857797557498817 29.64300613096662 22.359937761099896 23 19.681470482984146 30.11775568266069 28.91420007789748 21.28657375645768 24 19.22916094133371 27.279588685489912 35.41157153222761 18.07967884094877 25 20.002006749796852 28.306392140658332 32.42937328116443 19.262227828380386 26 18.877732590209828 33.46971982609486 27.961191633731588 19.69135594996372 27 18.78016303112143 32.96595642881574 30.160905746026533 18.092974794036294 28 17.216232727617818 30.466762094374577 34.08751208498339 18.22949309302422 29 17.97454689962099 27.797043454535746 34.03976527947204 20.18864436637122 30 19.452127649058014 29.925384495238173 31.749352007639487 18.873135848064326 31 24.741198474474736 28.97820847659023 27.52771390667724 18.7528791422578 32 25.25247482665834 28.444146123018704 28.25281290962904 18.05056614069392 33 24.466085928433174 29.479549934459353 26.937996374010716 19.11636776309676 34 19.49399260171651 30.558400373275234 28.92087276810869 21.026734256899562 35 20.567850879707706 29.276947288712975 29.412131049658658 20.743070781920668 36 25.173045099477452 29.057687631106006 27.58292423975816 18.186343029658378 37 19.72738847710427 32.23556870102986 29.05714393042213 18.97989889144373 38 20.237873991929504 32.45660774269316 26.928901744389506 20.376616520987834 39 19.448766590284958 31.48382836456811 28.458727186813576 20.608677858333348 40 22.449697801274436 28.544533040196285 28.047590615133068 20.958178543396212 41 18.657039539890825 27.73036597975852 29.590810865314467 24.021783615036192 42 21.390816005757294 28.279058824459806 27.703477509574075 22.62664766020882 43 21.092423184978834 28.20867429956524 28.122917873517427 22.5759846419385 44 19.716860454771023 30.478871791424556 28.820090432251927 20.984177321552494 45 19.15561306700567 33.23138121721732 26.20073824667403 21.41226746910297 46 21.480674900601628 31.73674803724053 26.47738304009743 20.30519402206041 47 20.18889150304571 29.92024405240879 28.284990104647555 21.605874339897944 48 21.057873477885224 29.539011018341494 29.52235400648091 19.880761497292372 49 21.003651691502252 28.124894966913345 29.481329318515677 21.390124023068726 50 19.36740919704306 31.671849946519625 28.71485963625436 20.24588122018296 51 18.583096246883606 31.96614029850156 27.12720421199977 22.32355924261506 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1244.0 1 2342.5 2 3441.0 3 14065.0 4 24689.0 5 17468.5 6 10248.0 7 10549.5 8 10851.0 9 12059.0 10 13267.0 11 14268.5 12 15270.0 13 15586.0 14 15902.0 15 15096.5 16 14291.0 17 13325.5 18 12360.0 19 12318.0 20 12276.0 21 12869.5 22 13463.0 23 14194.5 24 14926.0 25 16830.0 26 21758.5 27 24783.0 28 29125.0 29 33467.0 30 38024.5 31 42582.0 32 51074.5 33 59567.0 34 64842.5 35 70118.0 36 76340.5 37 82563.0 38 89537.0 39 96511.0 40 113884.0 41 131257.0 42 147533.5 43 163810.0 44 164991.5 45 166173.0 46 165878.5 47 165584.0 48 162280.5 49 158977.0 50 150645.0 51 142313.0 52 127563.0 53 112813.0 54 102081.5 55 91350.0 56 84313.0 57 77276.0 58 69706.5 59 62137.0 60 54689.5 61 47242.0 62 42188.5 63 37135.0 64 31247.5 65 25360.0 66 20770.0 67 16180.0 68 14094.0 69 12008.0 70 10354.0 71 8700.0 72 7431.5 73 6163.0 74 5187.0 75 3086.5 76 1962.0 77 1414.0 78 866.0 79 739.5 80 613.0 81 468.0 82 323.0 83 205.0 84 87.0 85 62.0 86 37.0 87 29.5 88 22.0 89 18.0 90 14.0 91 9.5 92 5.0 93 2.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2023172.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.729931119925542 #Duplication Level Percentage of deduplicated Percentage of total 1 81.23728569500473 19.27755193912175 2 7.108693741464673 3.37377625675205 3 2.4251123627837075 1.7264324798081179 4 1.2244430362275907 1.1622379563981289 5 0.8205143596319359 0.9735374618487825 6 0.5404512804353903 0.7694922995044426 7 0.43080022354876574 0.7156001741882515 8 0.31499206240898653 0.5979791955430832 9 0.2720080238531931 0.5809258503093004 >10 3.5133878682223867 20.60186134074991 >50 1.3723179193641903 23.19977406527198 >100 0.7364266882848575 25.53398208137954 >500 0.0027275061179671796 0.41741699605751653 >1k 6.294244887616568E-4 0.23683834091669922 >5k 0.0 0.0 >10k+ 2.0980816292055223E-4 0.832593562150507 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16723 0.8265733214971341 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2552 0.1261385586593725 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.885466979574648E-5 0.0 0.0 0.03341287839096231 0.0 2 9.885466979574648E-5 0.0 0.0 0.10078233585676354 0.0 3 9.885466979574648E-5 0.0 0.0 0.15544896825381135 0.0 4 9.885466979574648E-5 0.0 0.0 0.27446999068789013 0.0 5 9.885466979574648E-5 0.0 0.0 0.4686699895016341 0.0 6 9.885466979574648E-5 0.0 0.0 0.8770386304278628 0.0 7 9.885466979574648E-5 0.0 0.0 1.092195819238305 0.0 8 9.885466979574648E-5 0.0 0.0 1.5824161267554118 0.0 9 9.885466979574648E-5 0.0 0.0 1.7909994800244369 0.0 10 9.885466979574648E-5 0.0 0.0 2.098734067098596 0.0 11 9.885466979574648E-5 0.0 0.0 2.4029098860601077 0.0 12 9.885466979574648E-5 0.0 0.0 2.6500959878843715 0.0 13 9.885466979574648E-5 0.0 0.0 2.774652871827012 0.0 14 9.885466979574648E-5 0.0 0.0 2.841429201274039 0.0 15 1.4828200469361972E-4 0.0 0.0 2.908600949400249 0.0 16 1.4828200469361972E-4 0.0 0.0 3.0357280547575787 0.0 17 1.4828200469361972E-4 0.0 0.0 3.191523014355675 0.0 18 1.4828200469361972E-4 0.0 0.0 3.376331819538823 0.0 19 1.4828200469361972E-4 0.0 0.0 3.48215574355517 0.0 20 1.4828200469361972E-4 0.0 0.0 3.595591477145789 0.0 21 1.4828200469361972E-4 0.0 0.0 3.7469379766030766 0.0 22 1.9770933959149296E-4 0.0 0.0 3.910591882449935 0.0 23 1.9770933959149296E-4 0.0 0.0 4.092286765534517 0.0 24 1.9770933959149296E-4 0.0 0.0 4.233253524663252 0.0 25 1.9770933959149296E-4 0.0 0.0 4.355783887875079 0.0 26 1.9770933959149296E-4 0.0 0.0 4.474903764978954 0.0 27 1.9770933959149296E-4 0.0 0.0 4.598472102223637 0.0 28 1.9770933959149296E-4 0.0 0.0 4.734446700527686 0.0 29 1.9770933959149296E-4 0.0 0.0 4.880702184490493 0.0 30 1.9770933959149296E-4 0.0 0.0 5.066746673046088 0.0 31 1.9770933959149296E-4 0.0 0.0 5.234552475024367 0.0 32 1.9770933959149296E-4 0.0 0.0 5.386838093844715 0.0 33 1.9770933959149296E-4 0.0 0.0 5.539617986014041 0.0 34 1.9770933959149296E-4 0.0 0.0 5.706138677284977 0.0 35 1.9770933959149296E-4 0.0 0.0 5.89895471072158 0.0 36 1.9770933959149296E-4 0.0 0.0 6.061372933195991 0.0 37 2.4713667448936623E-4 0.0 0.0 6.234813451352628 0.0 38 2.4713667448936623E-4 0.0 0.0 6.4306939795529 0.0 39 2.4713667448936623E-4 0.0 0.0 6.736500900566042 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCACG 55 1.8189894E-12 45.0 1 AACGCGT 20 7.034561E-4 45.0 26 GTATCGC 20 7.034561E-4 45.0 24 TATGTCG 25 3.891862E-5 45.0 26 CGTTTTT 9500 0.0 42.678947 1 ACGGGAT 920 0.0 42.06522 5 CGACGGT 340 0.0 41.691177 28 ACGTTAG 60 3.6379788E-12 41.250004 1 GGGCGAT 2760 0.0 40.516304 7 AATCGGT 100 0.0 40.5 26 AGGGCGA 1575 0.0 40.142857 6 CACGACG 350 0.0 39.857143 26 TCACGAC 370 0.0 39.527027 25 GGCGATA 760 0.0 39.375004 8 ACTACGT 40 3.4599543E-7 39.375 28 CGGTCTA 355 0.0 39.295773 31 GCGAGAC 375 0.0 39.0 21 ACACGAC 375 0.0 39.0 26 TACGGGA 835 0.0 38.802395 4 TCCAACG 35 6.250644E-6 38.57143 14 >>END_MODULE