SRR1548181_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548181_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1415015
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11132	0.7867054412850747	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4806	0.33964304265325806	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACCGTC	35	1.2121927E-7	45.000004	26
CCGGGAT	45	3.8562575E-10	45.000004	5
CTATACG	70	0.0	45.000004	1
GTCTCCG	35	1.2121927E-7	45.000004	30
CACTGCG	45	3.8562575E-10	45.000004	1
TAACACG	70	0.0	45.000004	1
TGCGAAG	90	0.0	45.000004	1
ACAGCCG	35	1.2121927E-7	45.000004	34
CGACTAT	35	1.2121927E-7	45.000004	20
TCCGGAT	20	7.0338405E-4	45.0	18
CGGGTAG	75	0.0	45.0	6
AGTCCGA	20	7.0338405E-4	45.0	29
CACGGCG	20	7.0338405E-4	45.0	22
ACGTTAC	20	7.0338405E-4	45.0	41
CAACCGT	25	3.8912644E-5	45.0	37
CGCGCCT	20	7.0338405E-4	45.0	17
CAATTCG	20	7.0338405E-4	45.0	1
ACTTACG	20	7.0338405E-4	45.0	1
TACGATC	50	2.1827873E-11	45.0	17
TTCCACG	55	1.8189894E-12	45.0	24